Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers

Rice breeders are encouraged to classify potential F<sub>1</sub>-hybrids without crossing all viable mixtures by testing depending on genetic distance due to lack of labor and time in yield trials. The goals of this research were to establish heterosis and investigate the relationship be...

Full description

Bibliographic Details
Main Authors: Khaled F. M. Salem, Mousa A. Alghuthaymi, Abdelmoaty B. Elabd, Elsayed A. Elabsawy, Hossam H. Mierah
Format: Article
Language:English
Published: MDPI AG 2022-06-01
Series:Plants
Subjects:
Online Access:https://www.mdpi.com/2223-7747/11/12/1532
_version_ 1797483138660696064
author Khaled F. M. Salem
Mousa A. Alghuthaymi
Abdelmoaty B. Elabd
Elsayed A. Elabsawy
Hossam H. Mierah
author_facet Khaled F. M. Salem
Mousa A. Alghuthaymi
Abdelmoaty B. Elabd
Elsayed A. Elabsawy
Hossam H. Mierah
author_sort Khaled F. M. Salem
collection DOAJ
description Rice breeders are encouraged to classify potential F<sub>1</sub>-hybrids without crossing all viable mixtures by testing depending on genetic distance due to lack of labor and time in yield trials. The goals of this research were to establish heterosis and investigate the relationship between genomic distance and agronomic attributes under drought. Half-diallel mating design, 28 F<sub>1′</sub><sup>s</sup> and 8 parents were evaluated under drought and genotyped using 11 microsatellite markers. In total, 39 alleles were detected. Results indicated that the greatest heterotic effects for grain yield were observed in Sakha 103 × Sakha 104 and GZ7576-10-3-2-1 × Giza 179, which gave 29.32–22.57% heterosis, respectively. Heterosis for grain yield in these crosses occurred as a rise in panicle weight, filled grains per panicle, low sterility and 100-grain weight. Correlations of marker-based genetic distance with mid-parent heterosis were positively and significantly correlated with sterility percentage (<i>r</i> = 0.390 *, <i>p</i> < 0.05). However, better-parent heterosis was positively and significantly correlated with sterility percentage (<i>r</i> = 0.352 *, <i>p</i> < 0.05) and grain yield per plant (<i>r</i> = 0.345 *, <i>p</i> < 0.05). Associations indicate that high grain yield and low sterility of rice crosses can be expected from microsatellite marker-defined distances of parents. This study indicated that genetic distance is very effective for heterosis prediction in breeding programs.
first_indexed 2024-03-09T22:43:38Z
format Article
id doaj.art-8c7a5245299c4a1e8b61cb4807045fe5
institution Directory Open Access Journal
issn 2223-7747
language English
last_indexed 2024-03-09T22:43:38Z
publishDate 2022-06-01
publisher MDPI AG
record_format Article
series Plants
spelling doaj.art-8c7a5245299c4a1e8b61cb4807045fe52023-11-23T18:34:08ZengMDPI AGPlants2223-77472022-06-011112153210.3390/plants11121532Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite MarkersKhaled F. M. Salem0Mousa A. Alghuthaymi1Abdelmoaty B. Elabd2Elsayed A. Elabsawy3Hossam H. Mierah4Plant Biotechnology Department, Genetic Engineering and Biotechnology Research Institute (GEBRI), University of Sadat City, Sadat City 22857, EgyptBiology Department, Science and Humanities College, Shaqra University, Alquwayiyah 11726, Saudi ArabiaField Crops Research Institute, Agricultural Research Center (ARC), Giza 33717, EgyptBioinformatics Department, Genetic Engineering and Biotechnology Research Institute (GEBRI), University of Sadat City, Sadat City 22857, EgyptPlant Biotechnology Department, Genetic Engineering and Biotechnology Research Institute (GEBRI), University of Sadat City, Sadat City 22857, EgyptRice breeders are encouraged to classify potential F<sub>1</sub>-hybrids without crossing all viable mixtures by testing depending on genetic distance due to lack of labor and time in yield trials. The goals of this research were to establish heterosis and investigate the relationship between genomic distance and agronomic attributes under drought. Half-diallel mating design, 28 F<sub>1′</sub><sup>s</sup> and 8 parents were evaluated under drought and genotyped using 11 microsatellite markers. In total, 39 alleles were detected. Results indicated that the greatest heterotic effects for grain yield were observed in Sakha 103 × Sakha 104 and GZ7576-10-3-2-1 × Giza 179, which gave 29.32–22.57% heterosis, respectively. Heterosis for grain yield in these crosses occurred as a rise in panicle weight, filled grains per panicle, low sterility and 100-grain weight. Correlations of marker-based genetic distance with mid-parent heterosis were positively and significantly correlated with sterility percentage (<i>r</i> = 0.390 *, <i>p</i> < 0.05). However, better-parent heterosis was positively and significantly correlated with sterility percentage (<i>r</i> = 0.352 *, <i>p</i> < 0.05) and grain yield per plant (<i>r</i> = 0.345 *, <i>p</i> < 0.05). Associations indicate that high grain yield and low sterility of rice crosses can be expected from microsatellite marker-defined distances of parents. This study indicated that genetic distance is very effective for heterosis prediction in breeding programs.https://www.mdpi.com/2223-7747/11/12/1532agronomic traitsdroughtF<sub>1</sub>-hybridsheterosisgenetic distancerice (<i>Oryza sativa</i> L.)
spellingShingle Khaled F. M. Salem
Mousa A. Alghuthaymi
Abdelmoaty B. Elabd
Elsayed A. Elabsawy
Hossam H. Mierah
Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
Plants
agronomic traits
drought
F<sub>1</sub>-hybrids
heterosis
genetic distance
rice (<i>Oryza sativa</i> L.)
title Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
title_full Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
title_fullStr Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
title_full_unstemmed Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
title_short Prediction of Heterosis for Agronomic Traits in Half-Diallel Cross of Rice (<i>Oryza sativa</i> L.) under Drought Stress Using Microsatellite Markers
title_sort prediction of heterosis for agronomic traits in half diallel cross of rice i oryza sativa i l under drought stress using microsatellite markers
topic agronomic traits
drought
F<sub>1</sub>-hybrids
heterosis
genetic distance
rice (<i>Oryza sativa</i> L.)
url https://www.mdpi.com/2223-7747/11/12/1532
work_keys_str_mv AT khaledfmsalem predictionofheterosisforagronomictraitsinhalfdiallelcrossofriceioryzasativailunderdroughtstressusingmicrosatellitemarkers
AT mousaaalghuthaymi predictionofheterosisforagronomictraitsinhalfdiallelcrossofriceioryzasativailunderdroughtstressusingmicrosatellitemarkers
AT abdelmoatybelabd predictionofheterosisforagronomictraitsinhalfdiallelcrossofriceioryzasativailunderdroughtstressusingmicrosatellitemarkers
AT elsayedaelabsawy predictionofheterosisforagronomictraitsinhalfdiallelcrossofriceioryzasativailunderdroughtstressusingmicrosatellitemarkers
AT hossamhmierah predictionofheterosisforagronomictraitsinhalfdiallelcrossofriceioryzasativailunderdroughtstressusingmicrosatellitemarkers