Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria

Carboxysomes are protein-based bacterial organelles encapsulating key enzymes of the Calvin-Benson-Bassham cycle. Previous work has implicated a ParA-like protein (hereafter McdA) as important for spatially organizing carboxysomes along the longitudinal axis of the model cyanobacterium Synechococcus...

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Main Authors: Joshua S MacCready, Pusparanee Hakim, Eric J Young, Longhua Hu, Jian Liu, Katherine W Osteryoung, Anthony G Vecchiarelli, Daniel C Ducat
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2018-12-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/39723
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author Joshua S MacCready
Pusparanee Hakim
Eric J Young
Longhua Hu
Jian Liu
Katherine W Osteryoung
Anthony G Vecchiarelli
Daniel C Ducat
author_facet Joshua S MacCready
Pusparanee Hakim
Eric J Young
Longhua Hu
Jian Liu
Katherine W Osteryoung
Anthony G Vecchiarelli
Daniel C Ducat
author_sort Joshua S MacCready
collection DOAJ
description Carboxysomes are protein-based bacterial organelles encapsulating key enzymes of the Calvin-Benson-Bassham cycle. Previous work has implicated a ParA-like protein (hereafter McdA) as important for spatially organizing carboxysomes along the longitudinal axis of the model cyanobacterium Synechococcus elongatus PCC 7942. Yet, how self-organization of McdA emerges and contributes to carboxysome positioning is unknown. Here, we identify a small protein, termed McdB that localizes to carboxysomes and drives emergent oscillatory patterning of McdA on the nucleoid. Our results demonstrate that McdB directly stimulates McdA ATPase activity and its release from DNA, driving carboxysome-dependent depletion of McdA locally on the nucleoid and promoting directed motion of carboxysomes towards increased concentrations of McdA. We propose that McdA and McdB are a previously unknown class of self-organizing proteins that utilize a Brownian-ratchet mechanism to position carboxysomes in cyanobacteria, rather than a cytoskeletal system. These results have broader implications for understanding spatial organization of protein mega-complexes and organelles in bacteria.
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spelling doaj.art-8d45d2f2db4f4af1ae9a1222619da2982022-12-22T03:52:27ZengeLife Sciences Publications LtdeLife2050-084X2018-12-01710.7554/eLife.39723Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteriaJoshua S MacCready0https://orcid.org/0000-0001-6438-8110Pusparanee Hakim1https://orcid.org/0000-0002-9018-8179Eric J Young2https://orcid.org/0000-0002-6770-6310Longhua Hu3Jian Liu4Katherine W Osteryoung5https://orcid.org/0000-0002-0028-2509Anthony G Vecchiarelli6https://orcid.org/0000-0002-6198-3245Daniel C Ducat7https://orcid.org/0000-0002-1520-0588Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, United StatesDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Michigan, United StatesDepartment of Biochemistry, Michigan State University, East Lansing, United StatesBiochemistry and Biophysics Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United StatesBiochemistry and Biophysics Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, United StatesDepartment of Plant Biology, Michigan State University, East Lansing, United StatesDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Michigan, United StatesDepartment of Biochemistry, Michigan State University, East Lansing, United States; MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, United StatesCarboxysomes are protein-based bacterial organelles encapsulating key enzymes of the Calvin-Benson-Bassham cycle. Previous work has implicated a ParA-like protein (hereafter McdA) as important for spatially organizing carboxysomes along the longitudinal axis of the model cyanobacterium Synechococcus elongatus PCC 7942. Yet, how self-organization of McdA emerges and contributes to carboxysome positioning is unknown. Here, we identify a small protein, termed McdB that localizes to carboxysomes and drives emergent oscillatory patterning of McdA on the nucleoid. Our results demonstrate that McdB directly stimulates McdA ATPase activity and its release from DNA, driving carboxysome-dependent depletion of McdA locally on the nucleoid and promoting directed motion of carboxysomes towards increased concentrations of McdA. We propose that McdA and McdB are a previously unknown class of self-organizing proteins that utilize a Brownian-ratchet mechanism to position carboxysomes in cyanobacteria, rather than a cytoskeletal system. These results have broader implications for understanding spatial organization of protein mega-complexes and organelles in bacteria.https://elifesciences.org/articles/39723Synechococcus elongatus PCC 7942cyanobacteriacarboxysomesprotein self-organization
spellingShingle Joshua S MacCready
Pusparanee Hakim
Eric J Young
Longhua Hu
Jian Liu
Katherine W Osteryoung
Anthony G Vecchiarelli
Daniel C Ducat
Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
eLife
Synechococcus elongatus PCC 7942
cyanobacteria
carboxysomes
protein self-organization
title Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
title_full Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
title_fullStr Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
title_full_unstemmed Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
title_short Protein gradients on the nucleoid position the carbon-fixing organelles of cyanobacteria
title_sort protein gradients on the nucleoid position the carbon fixing organelles of cyanobacteria
topic Synechococcus elongatus PCC 7942
cyanobacteria
carboxysomes
protein self-organization
url https://elifesciences.org/articles/39723
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