TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network

Providing access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments wit...

Full description

Bibliographic Details
Main Authors: Matej Usaj, Yizhao Tan, Wen Wang, Benjamin VanderSluis, Albert Zou, Chad L. Myers, Michael Costanzo, Brenda Andrews, Charles Boone
Format: Article
Language:English
Published: Oxford University Press 2017-05-01
Series:G3: Genes, Genomes, Genetics
Subjects:
Online Access:http://g3journal.org/lookup/doi/10.1534/g3.117.040220
_version_ 1818891553872019456
author Matej Usaj
Yizhao Tan
Wen Wang
Benjamin VanderSluis
Albert Zou
Chad L. Myers
Michael Costanzo
Brenda Andrews
Charles Boone
author_facet Matej Usaj
Yizhao Tan
Wen Wang
Benjamin VanderSluis
Albert Zou
Chad L. Myers
Michael Costanzo
Brenda Andrews
Charles Boone
author_sort Matej Usaj
collection DOAJ
description Providing access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments with the budding yeast Saccharomyces cerevisiae. In particular, TheCellMap.org allows users to easily access, visualize, explore, and functionally annotate genetic interactions, or to extract and reorganize subnetworks, using data-driven network layouts in an intuitive and interactive manner.
first_indexed 2024-12-19T17:42:39Z
format Article
id doaj.art-8d6661a9770d4d72b591bcb9c7ff28de
institution Directory Open Access Journal
issn 2160-1836
language English
last_indexed 2024-12-19T17:42:39Z
publishDate 2017-05-01
publisher Oxford University Press
record_format Article
series G3: Genes, Genomes, Genetics
spelling doaj.art-8d6661a9770d4d72b591bcb9c7ff28de2022-12-21T20:12:10ZengOxford University PressG3: Genes, Genomes, Genetics2160-18362017-05-01751539154910.1534/g3.117.04022014TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction NetworkMatej UsajYizhao TanWen WangBenjamin VanderSluisAlbert ZouChad L. MyersMichael CostanzoBrenda AndrewsCharles BooneProviding access to quantitative genomic data is key to ensure large-scale data validation and promote new discoveries. TheCellMap.org serves as a central repository for storing and analyzing quantitative genetic interaction data produced by genome-scale Synthetic Genetic Array (SGA) experiments with the budding yeast Saccharomyces cerevisiae. In particular, TheCellMap.org allows users to easily access, visualize, explore, and functionally annotate genetic interactions, or to extract and reorganize subnetworks, using data-driven network layouts in an intuitive and interactive manner.http://g3journal.org/lookup/doi/10.1534/g3.117.040220genetic interactionsgenetic networkyeast geneticssynthetic genetic array SGA
spellingShingle Matej Usaj
Yizhao Tan
Wen Wang
Benjamin VanderSluis
Albert Zou
Chad L. Myers
Michael Costanzo
Brenda Andrews
Charles Boone
TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
G3: Genes, Genomes, Genetics
genetic interactions
genetic network
yeast genetics
synthetic genetic array SGA
title TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
title_full TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
title_fullStr TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
title_full_unstemmed TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
title_short TheCellMap.org: A Web-Accessible Database for Visualizing and Mining the Global Yeast Genetic Interaction Network
title_sort thecellmap org a web accessible database for visualizing and mining the global yeast genetic interaction network
topic genetic interactions
genetic network
yeast genetics
synthetic genetic array SGA
url http://g3journal.org/lookup/doi/10.1534/g3.117.040220
work_keys_str_mv AT matejusaj thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT yizhaotan thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT wenwang thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT benjaminvandersluis thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT albertzou thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT chadlmyers thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT michaelcostanzo thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT brendaandrews thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork
AT charlesboone thecellmaporgawebaccessibledatabaseforvisualizingandminingtheglobalyeastgeneticinteractionnetwork