SCPS: a fast implementation of a spectral method for detecting protein families on a genome-wide scale

<p>Abstract</p> <p>Background</p> <p>An important problem in genomics is the automatic inference of groups of homologous proteins from pairwise sequence similarities. Several approaches have been proposed for this task which are "local" in the sense that they...

Full description

Bibliographic Details
Main Authors: Paccanaro Alberto, Sasidharan Rajkumar, Nepusz Tamás
Format: Article
Language:English
Published: BMC 2010-03-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/11/120