Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense

Summary: CRISPR-Cas immune systems provide bacteria with adaptive immunity against bacteriophages, but they are often transcriptionally repressed to mitigate auto-immunity. In some cases, CRISPR-Cas expression increases in response to a phage infection, but the mechanisms of induction are largely un...

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Main Authors: Rachael E. Workman, Marie J. Stoltzfus, Nicholas C. Keith, Chad W. Euler, Joseph Bondy-Denomy, Joshua W. Modell
Format: Article
Language:English
Published: Elsevier 2024-03-01
Series:Cell Reports
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2211124724001773
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author Rachael E. Workman
Marie J. Stoltzfus
Nicholas C. Keith
Chad W. Euler
Joseph Bondy-Denomy
Joshua W. Modell
author_facet Rachael E. Workman
Marie J. Stoltzfus
Nicholas C. Keith
Chad W. Euler
Joseph Bondy-Denomy
Joshua W. Modell
author_sort Rachael E. Workman
collection DOAJ
description Summary: CRISPR-Cas immune systems provide bacteria with adaptive immunity against bacteriophages, but they are often transcriptionally repressed to mitigate auto-immunity. In some cases, CRISPR-Cas expression increases in response to a phage infection, but the mechanisms of induction are largely unknown, and it is unclear whether induction occurs strongly and quickly enough to benefit the bacterial host. In S. pyogenes, Cas9 is both an immune effector and auto-repressor of CRISPR-Cas expression. Here, we show that phage-encoded anti-CRISPR proteins relieve Cas9 auto-repression and trigger a rapid increase in CRISPR-Cas levels during a single phage infective cycle. As a result, fewer cells succumb to lysis, leading to a striking survival benefit after multiple rounds of infection. CRISPR-Cas induction also reduces lysogeny, thereby limiting a route for horizontal gene transfer. Altogether, we show that Cas9 is not only a CRISPR-Cas effector and repressor but also a phage sensor that can mount an anti-anti-CRISPR transcriptional response.
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spelling doaj.art-8f1d1d1e943a4010b6fec27b0be2675a2024-03-01T05:06:01ZengElsevierCell Reports2211-12472024-03-01433113849Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defenseRachael E. Workman0Marie J. Stoltzfus1Nicholas C. Keith2Chad W. Euler3Joseph Bondy-Denomy4Joshua W. Modell5Department of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USADepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USADepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USADepartment of Medical Laboratory Sciences, Hunter College, CUNY, New York, NY 10021, USA; Department of Microbiology and Immunology, Weill Cornell Medical College, New York, NY 10021, USADepartment of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; Innovative Genomics Institute, Berkeley, CA, USADepartment of Molecular Biology & Genetics, Johns Hopkins University School of Medicine, Baltimore, MD 21205, USA; Corresponding authorSummary: CRISPR-Cas immune systems provide bacteria with adaptive immunity against bacteriophages, but they are often transcriptionally repressed to mitigate auto-immunity. In some cases, CRISPR-Cas expression increases in response to a phage infection, but the mechanisms of induction are largely unknown, and it is unclear whether induction occurs strongly and quickly enough to benefit the bacterial host. In S. pyogenes, Cas9 is both an immune effector and auto-repressor of CRISPR-Cas expression. Here, we show that phage-encoded anti-CRISPR proteins relieve Cas9 auto-repression and trigger a rapid increase in CRISPR-Cas levels during a single phage infective cycle. As a result, fewer cells succumb to lysis, leading to a striking survival benefit after multiple rounds of infection. CRISPR-Cas induction also reduces lysogeny, thereby limiting a route for horizontal gene transfer. Altogether, we show that Cas9 is not only a CRISPR-Cas effector and repressor but also a phage sensor that can mount an anti-anti-CRISPR transcriptional response.http://www.sciencedirect.com/science/article/pii/S2211124724001773CP: Microbiology
spellingShingle Rachael E. Workman
Marie J. Stoltzfus
Nicholas C. Keith
Chad W. Euler
Joseph Bondy-Denomy
Joshua W. Modell
Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
Cell Reports
CP: Microbiology
title Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
title_full Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
title_fullStr Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
title_full_unstemmed Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
title_short Anti-CRISPR proteins trigger a burst of CRISPR-Cas9 expression that enhances phage defense
title_sort anti crispr proteins trigger a burst of crispr cas9 expression that enhances phage defense
topic CP: Microbiology
url http://www.sciencedirect.com/science/article/pii/S2211124724001773
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