Global gene expression profiling of blast lung injury of goats exposed to shock wave
Purpose: Blast lung injury (BLI) is the most common damage resulted from explosion-derived shock wave in military, terrorism and industrial accidents. However, the molecular mechanisms underlying BLI induced by shock wave are still unclear. Methods: In this study, a goat BLI model was established by...
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
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Elsevier
2020-10-01
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| Series: | Chinese Journal of Traumatology |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S1008127520301747 |
| _version_ | 1818454431498240000 |
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| author | Hong Wang Wen-Juan Zhang Jun-Hong Gao Jin-Ren Liu Zhi-Yong Liu Bao-Qing Xia Xiao-Lin Fan Cun-Zhi Li Ai-Rong Qian |
| author_facet | Hong Wang Wen-Juan Zhang Jun-Hong Gao Jin-Ren Liu Zhi-Yong Liu Bao-Qing Xia Xiao-Lin Fan Cun-Zhi Li Ai-Rong Qian |
| author_sort | Hong Wang |
| collection | DOAJ |
| description | Purpose: Blast lung injury (BLI) is the most common damage resulted from explosion-derived shock wave in military, terrorism and industrial accidents. However, the molecular mechanisms underlying BLI induced by shock wave are still unclear. Methods: In this study, a goat BLI model was established by a fuel air explosive power. The key genes involved in were identified. The goats of the experimental group were fixed on the edge of the explosion cloud, while the goats of the control group were 3 km far away from the explosive environment. After successful modeling for 24 h, all the goats were sacrificed and the lung tissue was harvested for histopathological observation and RNA sequencing. Gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) analysis were performed to identify the main enriched biological functions of differentially expressed genes (DEGs). Quantitative real-time polymerase chain reaction (qRT-PCR) was used to verify the consistency of gene expression. Results: Of the sampled goat lungs, 895 genes were identified to be significantly differentially expressed, and they were involved in 52 significantly enriched GO categories. KEGG analysis revealed that DEGs were highly enriched in 26 pathways, such as cytokine-cytokine receptor interaction, antifolate resistance, arachidonic acid metabolism, amoebiasis and bile secretion, JAK-STAT, and IL-17 signaling pathway. Furthermore, 15 key DEGs involved in the biological processes of BLI were confirmed by qRT-PCR, and the results were consistent with RNA sequencing. Conclusion: Gene expression profiling provide a better understanding of the molecular mechanisms of BLI, which will help to set strategy for treating lung injury and preventing secondary lung injury induced by shock wave. |
| first_indexed | 2024-12-14T21:54:46Z |
| format | Article |
| id | doaj.art-907f34f5a81543a1ade266d4509e199d |
| institution | Directory Open Access Journal |
| issn | 1008-1275 |
| language | English |
| last_indexed | 2024-12-14T21:54:46Z |
| publishDate | 2020-10-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Chinese Journal of Traumatology |
| spelling | doaj.art-907f34f5a81543a1ade266d4509e199d2022-12-21T22:46:10ZengElsevierChinese Journal of Traumatology1008-12752020-10-01235249257Global gene expression profiling of blast lung injury of goats exposed to shock waveHong Wang0Wen-Juan Zhang1Jun-Hong Gao2Jin-Ren Liu3Zhi-Yong Liu4Bao-Qing Xia5Xiao-Lin Fan6Cun-Zhi Li7Ai-Rong Qian8Lab for Bone Metabolism, Xi'an Key Laboratory of Special Medicine and Health Engineering, Key Lab for Space Biosciences and Biotechnology, Research Center for Special Medicine and Health Systems Engineering, NPU-UAB Joint Laboratory for Bone Metabolism, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China; Research Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaLab for Bone Metabolism, Xi'an Key Laboratory of Special Medicine and Health Engineering, Key Lab for Space Biosciences and Biotechnology, Research Center for Special Medicine and Health Systems Engineering, NPU-UAB Joint Laboratory for Bone Metabolism, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, ChinaResearch Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaResearch Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaLab for Bone Metabolism, Xi'an Key Laboratory of Special Medicine and Health Engineering, Key Lab for Space Biosciences and Biotechnology, Research Center for Special Medicine and Health Systems Engineering, NPU-UAB Joint Laboratory for Bone Metabolism, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China; Research Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaResearch Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaResearch Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaResearch Center for Toxicological and Biological Effects, Institute for Hygiene of Ordnance Industry, Xi'an 710065, ChinaLab for Bone Metabolism, Xi'an Key Laboratory of Special Medicine and Health Engineering, Key Lab for Space Biosciences and Biotechnology, Research Center for Special Medicine and Health Systems Engineering, NPU-UAB Joint Laboratory for Bone Metabolism, School of Life Sciences, Northwestern Polytechnical University, Xi'an 710072, China; Corresponding author.Purpose: Blast lung injury (BLI) is the most common damage resulted from explosion-derived shock wave in military, terrorism and industrial accidents. However, the molecular mechanisms underlying BLI induced by shock wave are still unclear. Methods: In this study, a goat BLI model was established by a fuel air explosive power. The key genes involved in were identified. The goats of the experimental group were fixed on the edge of the explosion cloud, while the goats of the control group were 3 km far away from the explosive environment. After successful modeling for 24 h, all the goats were sacrificed and the lung tissue was harvested for histopathological observation and RNA sequencing. Gene ontology (GO) and kyoto encyclopedia of genes and genomes (KEGG) analysis were performed to identify the main enriched biological functions of differentially expressed genes (DEGs). Quantitative real-time polymerase chain reaction (qRT-PCR) was used to verify the consistency of gene expression. Results: Of the sampled goat lungs, 895 genes were identified to be significantly differentially expressed, and they were involved in 52 significantly enriched GO categories. KEGG analysis revealed that DEGs were highly enriched in 26 pathways, such as cytokine-cytokine receptor interaction, antifolate resistance, arachidonic acid metabolism, amoebiasis and bile secretion, JAK-STAT, and IL-17 signaling pathway. Furthermore, 15 key DEGs involved in the biological processes of BLI were confirmed by qRT-PCR, and the results were consistent with RNA sequencing. Conclusion: Gene expression profiling provide a better understanding of the molecular mechanisms of BLI, which will help to set strategy for treating lung injury and preventing secondary lung injury induced by shock wave.http://www.sciencedirect.com/science/article/pii/S1008127520301747Blast lung injuryShock waveDifferentially expressed genesRNA sequencingTranscriptome |
| spellingShingle | Hong Wang Wen-Juan Zhang Jun-Hong Gao Jin-Ren Liu Zhi-Yong Liu Bao-Qing Xia Xiao-Lin Fan Cun-Zhi Li Ai-Rong Qian Global gene expression profiling of blast lung injury of goats exposed to shock wave Chinese Journal of Traumatology Blast lung injury Shock wave Differentially expressed genes RNA sequencing Transcriptome |
| title | Global gene expression profiling of blast lung injury of goats exposed to shock wave |
| title_full | Global gene expression profiling of blast lung injury of goats exposed to shock wave |
| title_fullStr | Global gene expression profiling of blast lung injury of goats exposed to shock wave |
| title_full_unstemmed | Global gene expression profiling of blast lung injury of goats exposed to shock wave |
| title_short | Global gene expression profiling of blast lung injury of goats exposed to shock wave |
| title_sort | global gene expression profiling of blast lung injury of goats exposed to shock wave |
| topic | Blast lung injury Shock wave Differentially expressed genes RNA sequencing Transcriptome |
| url | http://www.sciencedirect.com/science/article/pii/S1008127520301747 |
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