RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus
Identification of genes expressed during the Golovinomyces orontii infection process in Helianthus niveus assumes importance for incorporation of resistance to powdery mildew in cultivated sunflower (H. annuus L.) from this donor species. RNA-seq analysis of control (uninfected) and infected samples...
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| Format: | Article |
| Language: | English |
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Elsevier
2018-04-01
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| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340917307461 |
| _version_ | 1811259177530556416 |
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| author | Mulpuri Sujatha Kandasamy Ulaganathan Bhupatipalli Divya Bhanu Prashant Kumar Soni |
| author_facet | Mulpuri Sujatha Kandasamy Ulaganathan Bhupatipalli Divya Bhanu Prashant Kumar Soni |
| author_sort | Mulpuri Sujatha |
| collection | DOAJ |
| description | Identification of genes expressed during the Golovinomyces orontii infection process in Helianthus niveus assumes importance for incorporation of resistance to powdery mildew in cultivated sunflower (H. annuus L.) from this donor species. RNA-seq analysis of control (uninfected) and infected samples of H. niveus resulted in identification of 231,754 transcripts. A total of 3726 transcripts were differentially expressed of which 205 were specifically expressed in control and 1961 in infected samples. Functional annotation of the differentially expressed transcripts showed significant upregulation of GRAS type transcription factor (TF) and plant specific GATA-type zinc finger TF in infected samples and the K-box, MADS box TF and WRKY family TF in control tissues. Gene ontology classification showed that genes involved in cell and cell part functioning, catalytic and metabolic processes were significantly and highly expressed. This is the first application of RNA-Seq for identification of key genes and pathways involved in powdery mildew infection process in a Helianthus species conferring resistance to the pathogen. Keywords: Golovinomyces orontii, Helianthus niveus, Powdery mildew, RNA-seq, Transcriptome |
| first_indexed | 2024-04-12T18:26:34Z |
| format | Article |
| id | doaj.art-9123cee6dd4843a9bb73d4a132f5e634 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-12T18:26:34Z |
| publishDate | 2018-04-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-9123cee6dd4843a9bb73d4a132f5e6342022-12-22T03:21:14ZengElsevierData in Brief2352-34092018-04-0117210217RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveusMulpuri Sujatha0Kandasamy Ulaganathan1Bhupatipalli Divya Bhanu2Prashant Kumar Soni3ICAR- Indian Institute of Oilseeds Research, Rajendra nagar, Hyderabad 500030, Telangana, India; Corresponding author.Centre for Plant Molecular Biology, Osmania University, Hyderabad 500007, Telangana State, IndiaCentre for Plant Molecular Biology, Osmania University, Hyderabad 500007, Telangana State, IndiaICAR- Indian Institute of Oilseeds Research, Rajendra nagar, Hyderabad 500030, Telangana, IndiaIdentification of genes expressed during the Golovinomyces orontii infection process in Helianthus niveus assumes importance for incorporation of resistance to powdery mildew in cultivated sunflower (H. annuus L.) from this donor species. RNA-seq analysis of control (uninfected) and infected samples of H. niveus resulted in identification of 231,754 transcripts. A total of 3726 transcripts were differentially expressed of which 205 were specifically expressed in control and 1961 in infected samples. Functional annotation of the differentially expressed transcripts showed significant upregulation of GRAS type transcription factor (TF) and plant specific GATA-type zinc finger TF in infected samples and the K-box, MADS box TF and WRKY family TF in control tissues. Gene ontology classification showed that genes involved in cell and cell part functioning, catalytic and metabolic processes were significantly and highly expressed. This is the first application of RNA-Seq for identification of key genes and pathways involved in powdery mildew infection process in a Helianthus species conferring resistance to the pathogen. Keywords: Golovinomyces orontii, Helianthus niveus, Powdery mildew, RNA-seq, Transcriptomehttp://www.sciencedirect.com/science/article/pii/S2352340917307461 |
| spellingShingle | Mulpuri Sujatha Kandasamy Ulaganathan Bhupatipalli Divya Bhanu Prashant Kumar Soni RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus Data in Brief |
| title | RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus |
| title_full | RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus |
| title_fullStr | RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus |
| title_full_unstemmed | RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus |
| title_short | RNA-seq data of control and powdery mildew pathogen (Golovinomyces orontii) treated transcriptomes of Helianthus niveus |
| title_sort | rna seq data of control and powdery mildew pathogen golovinomyces orontii treated transcriptomes of helianthus niveus |
| url | http://www.sciencedirect.com/science/article/pii/S2352340917307461 |
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