Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care

AI model development for synthetic data generation to improve Machine Learning (ML) methodologies is an integral part of research in Computer Science and is currently being transferred to related medical fields, such as Systems Medicine and Medical Informatics. In general, the idea of personalized d...

Full description

Bibliographic Details
Main Authors: Waldemar Hahn, Katharina Schütte, Kristian Schultz, Olaf Wolkenhauer, Martin Sedlmayr, Ulrich Schuler, Martin Eichler, Saptarshi Bej, Markus Wolfien
Format: Article
Language:English
Published: MDPI AG 2022-08-01
Series:Journal of Personalized Medicine
Subjects:
Online Access:https://www.mdpi.com/2075-4426/12/8/1278
_version_ 1797409406651990016
author Waldemar Hahn
Katharina Schütte
Kristian Schultz
Olaf Wolkenhauer
Martin Sedlmayr
Ulrich Schuler
Martin Eichler
Saptarshi Bej
Markus Wolfien
author_facet Waldemar Hahn
Katharina Schütte
Kristian Schultz
Olaf Wolkenhauer
Martin Sedlmayr
Ulrich Schuler
Martin Eichler
Saptarshi Bej
Markus Wolfien
author_sort Waldemar Hahn
collection DOAJ
description AI model development for synthetic data generation to improve Machine Learning (ML) methodologies is an integral part of research in Computer Science and is currently being transferred to related medical fields, such as Systems Medicine and Medical Informatics. In general, the idea of personalized decision-making support based on patient data has driven the motivation of researchers in the medical domain for more than a decade, but the overall sparsity and scarcity of data are still major limitations. This is in contrast to currently applied technology that allows us to generate and analyze patient data in diverse forms, such as tabular data on health records, medical images, genomics data, or even audio and video. One solution arising to overcome these data limitations in relation to medical records is the synthetic generation of tabular data based on real world data. Consequently, ML-assisted decision-support can be interpreted more conveniently, using more relevant patient data at hand. At a methodological level, several state-of-the-art ML algorithms generate and derive decisions from such data. However, there remain key issues that hinder a broad practical implementation in real-life clinical settings. In this review, we will give for the first time insights towards current perspectives and potential impacts of using synthetic data generation in palliative care screening because it is a challenging prime example of highly individualized, sparsely available patient information. Taken together, the reader will obtain initial starting points and suitable solutions relevant for generating and using synthetic data for ML-based screenings in palliative care and beyond.
first_indexed 2024-03-09T04:15:12Z
format Article
id doaj.art-928779c7cc1141d6bfbcceb3b58889b7
institution Directory Open Access Journal
issn 2075-4426
language English
last_indexed 2024-03-09T04:15:12Z
publishDate 2022-08-01
publisher MDPI AG
record_format Article
series Journal of Personalized Medicine
spelling doaj.art-928779c7cc1141d6bfbcceb3b58889b72023-12-03T13:56:07ZengMDPI AGJournal of Personalized Medicine2075-44262022-08-01128127810.3390/jpm12081278Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative CareWaldemar Hahn0Katharina Schütte1Kristian Schultz2Olaf Wolkenhauer3Martin Sedlmayr4Ulrich Schuler5Martin Eichler6Saptarshi Bej7Markus Wolfien8Institute for Medical Informatics and Biometry, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, GermanyUniversity Palliative Center, University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, GermanyDepartment of Systems Biology and Bioinformatics, University of Rostock, Universitätsplatz 1, 18051 Rostock, GermanyDepartment of Systems Biology and Bioinformatics, University of Rostock, Universitätsplatz 1, 18051 Rostock, GermanyInstitute for Medical Informatics and Biometry, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, GermanyUniversity Palliative Center, University Hospital Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, GermanyNational Center for Tumor Diseases Dresden (NCT/UCC), Fetscherstraße 74, 01307 Dresden, GermanyDepartment of Systems Biology and Bioinformatics, University of Rostock, Universitätsplatz 1, 18051 Rostock, GermanyInstitute for Medical Informatics and Biometry, Faculty of Medicine Carl Gustav Carus, Technische Universität Dresden, Fetscherstraße 74, 01307 Dresden, GermanyAI model development for synthetic data generation to improve Machine Learning (ML) methodologies is an integral part of research in Computer Science and is currently being transferred to related medical fields, such as Systems Medicine and Medical Informatics. In general, the idea of personalized decision-making support based on patient data has driven the motivation of researchers in the medical domain for more than a decade, but the overall sparsity and scarcity of data are still major limitations. This is in contrast to currently applied technology that allows us to generate and analyze patient data in diverse forms, such as tabular data on health records, medical images, genomics data, or even audio and video. One solution arising to overcome these data limitations in relation to medical records is the synthetic generation of tabular data based on real world data. Consequently, ML-assisted decision-support can be interpreted more conveniently, using more relevant patient data at hand. At a methodological level, several state-of-the-art ML algorithms generate and derive decisions from such data. However, there remain key issues that hinder a broad practical implementation in real-life clinical settings. In this review, we will give for the first time insights towards current perspectives and potential impacts of using synthetic data generation in palliative care screening because it is a challenging prime example of highly individualized, sparsely available patient information. Taken together, the reader will obtain initial starting points and suitable solutions relevant for generating and using synthetic data for ML-based screenings in palliative care and beyond.https://www.mdpi.com/2075-4426/12/8/1278palliative carescreeningpersonalized medicinesynthetic data generationGANs
spellingShingle Waldemar Hahn
Katharina Schütte
Kristian Schultz
Olaf Wolkenhauer
Martin Sedlmayr
Ulrich Schuler
Martin Eichler
Saptarshi Bej
Markus Wolfien
Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
Journal of Personalized Medicine
palliative care
screening
personalized medicine
synthetic data generation
GANs
title Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
title_full Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
title_fullStr Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
title_full_unstemmed Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
title_short Contribution of Synthetic Data Generation towards an Improved Patient Stratification in Palliative Care
title_sort contribution of synthetic data generation towards an improved patient stratification in palliative care
topic palliative care
screening
personalized medicine
synthetic data generation
GANs
url https://www.mdpi.com/2075-4426/12/8/1278
work_keys_str_mv AT waldemarhahn contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT katharinaschutte contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT kristianschultz contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT olafwolkenhauer contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT martinsedlmayr contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT ulrichschuler contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT martineichler contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT saptarshibej contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare
AT markuswolfien contributionofsyntheticdatagenerationtowardsanimprovedpatientstratificationinpalliativecare