Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.

Inhaled antibiotics control chronic airway infection and maintain respiratory health in cystic fibrosis (CF). Given variation in patient responses to inhaled antibiotics, the ability to identify distinct responder phenotypes would facilitate the delivery of personalized care. Previously, a 10-gene p...

Full description

Bibliographic Details
Main Authors: Silvia M Caceres, Linda A Sanders, Noel M Rysavy, Katie R Poch, Caroline R Jones, Kyle Pickard, Tasha E Fingerlin, Roland A Marcus, Kenneth C Malcolm, Jennifer L Taylor-Cousar, David P Nichols, Jerry A Nick, Matthew Strand, Milene T Saavedra
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2022-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0267592
_version_ 1811238187503190016
author Silvia M Caceres
Linda A Sanders
Noel M Rysavy
Katie R Poch
Caroline R Jones
Kyle Pickard
Tasha E Fingerlin
Roland A Marcus
Kenneth C Malcolm
Jennifer L Taylor-Cousar
David P Nichols
Jerry A Nick
Matthew Strand
Milene T Saavedra
author_facet Silvia M Caceres
Linda A Sanders
Noel M Rysavy
Katie R Poch
Caroline R Jones
Kyle Pickard
Tasha E Fingerlin
Roland A Marcus
Kenneth C Malcolm
Jennifer L Taylor-Cousar
David P Nichols
Jerry A Nick
Matthew Strand
Milene T Saavedra
author_sort Silvia M Caceres
collection DOAJ
description Inhaled antibiotics control chronic airway infection and maintain respiratory health in cystic fibrosis (CF). Given variation in patient responses to inhaled antibiotics, the ability to identify distinct responder phenotypes would facilitate the delivery of personalized care. Previously, a 10-gene panel was identified, measured directly from blood leukocytes, which predicted host response to intravenous antibiotic treatment during pulmonary exacerbations. In the current study, we tested whether the same panel predicted clinical response in subjects receiving a month of inhaled antibiotic therapy with aztreonam lysine (AZLI; Cayston®). A small cohort of CF subjects infected with Pseudomonas aeruginosa were enrolled at baseline health, prior to initiating one month's treatment with AZLI using the Altera® nebulizer system. Eighteen CF subjects underwent blood leukocyte gene panel measurements, sputum quantitative microbiology, spirometry, and C-reactive protein (CRP) measurement prior to onset and at completion of 4 weeks of AZLI therapy. Mean absolute improvement in percent predicted Forced Expiratory Volume in one second (ppFEV1) was 3%. Significant reductions in sputum bacterial colony counts were detected with treatment. CRP increased following treatment. While single genes within the panel did not change significantly following treatment, the analysis of multigene panel data demonstrated that HCA112 gene predicted ppFEV1 improvement. Hierarchical clustering based on gene expression yielded two distinctive molecular clusters before and after AZLI therapy. In conclusion, peripheral blood leukocyte genes quantifying inflammation are associated with responses to inhaled antibiotic therapy. Molecular quantification of systemic inflammation may indicate subgroups of CF subjects with variations in underlying inflammation and with variable clinical responses to inhaled antibiotics. Given the size limitation of the study, larger studies are needed in order to evaluate whether molecular measures may add precision to the determination of infectious and inflammatory outcomes following courses of inhaled antimicrobial therapies. Clinical Trials.gov Identifier: NCT01736839.
first_indexed 2024-04-12T12:37:31Z
format Article
id doaj.art-930d4219f3bd49eba56481bc0b57608b
institution Directory Open Access Journal
issn 1932-6203
language English
last_indexed 2024-04-12T12:37:31Z
publishDate 2022-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj.art-930d4219f3bd49eba56481bc0b57608b2022-12-22T03:32:52ZengPublic Library of Science (PLoS)PLoS ONE1932-62032022-01-01175e026759210.1371/journal.pone.0267592Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.Silvia M CaceresLinda A SandersNoel M RysavyKatie R PochCaroline R JonesKyle PickardTasha E FingerlinRoland A MarcusKenneth C MalcolmJennifer L Taylor-CousarDavid P NicholsJerry A NickMatthew StrandMilene T SaavedraInhaled antibiotics control chronic airway infection and maintain respiratory health in cystic fibrosis (CF). Given variation in patient responses to inhaled antibiotics, the ability to identify distinct responder phenotypes would facilitate the delivery of personalized care. Previously, a 10-gene panel was identified, measured directly from blood leukocytes, which predicted host response to intravenous antibiotic treatment during pulmonary exacerbations. In the current study, we tested whether the same panel predicted clinical response in subjects receiving a month of inhaled antibiotic therapy with aztreonam lysine (AZLI; Cayston®). A small cohort of CF subjects infected with Pseudomonas aeruginosa were enrolled at baseline health, prior to initiating one month's treatment with AZLI using the Altera® nebulizer system. Eighteen CF subjects underwent blood leukocyte gene panel measurements, sputum quantitative microbiology, spirometry, and C-reactive protein (CRP) measurement prior to onset and at completion of 4 weeks of AZLI therapy. Mean absolute improvement in percent predicted Forced Expiratory Volume in one second (ppFEV1) was 3%. Significant reductions in sputum bacterial colony counts were detected with treatment. CRP increased following treatment. While single genes within the panel did not change significantly following treatment, the analysis of multigene panel data demonstrated that HCA112 gene predicted ppFEV1 improvement. Hierarchical clustering based on gene expression yielded two distinctive molecular clusters before and after AZLI therapy. In conclusion, peripheral blood leukocyte genes quantifying inflammation are associated with responses to inhaled antibiotic therapy. Molecular quantification of systemic inflammation may indicate subgroups of CF subjects with variations in underlying inflammation and with variable clinical responses to inhaled antibiotics. Given the size limitation of the study, larger studies are needed in order to evaluate whether molecular measures may add precision to the determination of infectious and inflammatory outcomes following courses of inhaled antimicrobial therapies. Clinical Trials.gov Identifier: NCT01736839.https://doi.org/10.1371/journal.pone.0267592
spellingShingle Silvia M Caceres
Linda A Sanders
Noel M Rysavy
Katie R Poch
Caroline R Jones
Kyle Pickard
Tasha E Fingerlin
Roland A Marcus
Kenneth C Malcolm
Jennifer L Taylor-Cousar
David P Nichols
Jerry A Nick
Matthew Strand
Milene T Saavedra
Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
PLoS ONE
title Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
title_full Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
title_fullStr Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
title_full_unstemmed Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
title_short Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial.
title_sort blood mrna biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis a prospective non randomized trial
url https://doi.org/10.1371/journal.pone.0267592
work_keys_str_mv AT silviamcaceres bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT lindaasanders bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT noelmrysavy bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT katierpoch bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT carolinerjones bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT kylepickard bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT tashaefingerlin bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT rolandamarcus bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT kennethcmalcolm bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT jenniferltaylorcousar bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT davidpnichols bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT jerryanick bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT matthewstrand bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial
AT milenetsaavedra bloodmrnabiomarkersdistinguishvariablesystemicandsputuminflammationattreatmentinitiationofinhaledantibioticsincysticfibrosisaprospectivenonrandomizedtrial