Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae)
The complete chloroplast genome (plastome) of Maclura tricuspidate Carriere, a thorny and deciduous tree, is determined. The plastome is 161,348 bp in length, consisting of a 89,364 bp large single-copy region, a 20,246 bp small single-copy region, and two 25,869 bp inverted repeat regions. The GC c...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-03-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1891986 |
| _version_ | 1797638948396204032 |
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| author | Xin-Xin Zhu Rong Wang Xue-Jie Zhang |
| author_facet | Xin-Xin Zhu Rong Wang Xue-Jie Zhang |
| author_sort | Xin-Xin Zhu |
| collection | DOAJ |
| description | The complete chloroplast genome (plastome) of Maclura tricuspidate Carriere, a thorny and deciduous tree, is determined. The plastome is 161,348 bp in length, consisting of a 89,364 bp large single-copy region, a 20,246 bp small single-copy region, and two 25,869 bp inverted repeat regions. The GC content of this plastome is 36.1%. A total of 112 unique genes are annotated for the plastome of M. tricuspidata, containing 78 protein coding genes (PCGs), 30 tRNAs, and four rRNAs. Phylogenetic analysis shows that M. tricuspidata is sister to the clade comprising Dorstenieae, Castilleae, and Ficeae. |
| first_indexed | 2024-03-11T13:10:45Z |
| format | Article |
| id | doaj.art-9485e364fdbe40d69f1628362fa47366 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:45Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9485e364fdbe40d69f1628362fa473662023-11-03T14:16:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016399399410.1080/23802359.2021.18919861891986Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae)Xin-Xin Zhu0Rong Wang1Xue-Jie Zhang2Shandong Provincial Key Laboratory of Plant Stress Research, College of Life Sciences, Shandong Normal UniversityShandong Provincial Key Laboratory of Plant Stress Research, College of Life Sciences, Shandong Normal UniversityShandong Provincial Key Laboratory of Plant Stress Research, College of Life Sciences, Shandong Normal UniversityThe complete chloroplast genome (plastome) of Maclura tricuspidate Carriere, a thorny and deciduous tree, is determined. The plastome is 161,348 bp in length, consisting of a 89,364 bp large single-copy region, a 20,246 bp small single-copy region, and two 25,869 bp inverted repeat regions. The GC content of this plastome is 36.1%. A total of 112 unique genes are annotated for the plastome of M. tricuspidata, containing 78 protein coding genes (PCGs), 30 tRNAs, and four rRNAs. Phylogenetic analysis shows that M. tricuspidata is sister to the clade comprising Dorstenieae, Castilleae, and Ficeae.http://dx.doi.org/10.1080/23802359.2021.1891986maclura tricuspidataplastomephylogenomics |
| spellingShingle | Xin-Xin Zhu Rong Wang Xue-Jie Zhang Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) Mitochondrial DNA. Part B. Resources maclura tricuspidata plastome phylogenomics |
| title | Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) |
| title_full | Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) |
| title_fullStr | Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) |
| title_full_unstemmed | Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) |
| title_short | Characterization and phylogenetic analysis of the complete plastome of Maclura tricuspidata (Moraceae) |
| title_sort | characterization and phylogenetic analysis of the complete plastome of maclura tricuspidata moraceae |
| topic | maclura tricuspidata plastome phylogenomics |
| url | http://dx.doi.org/10.1080/23802359.2021.1891986 |
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