The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868)
In this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control reg...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-02-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1878952 |
| _version_ | 1797638948827168768 |
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| author | Hongtao Liu Liyun Pu |
| author_facet | Hongtao Liu Liyun Pu |
| author_sort | Hongtao Liu |
| collection | DOAJ |
| description | In this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of P. longipes mitogenome is significantly biased (A, G, T, and C was 32.06%, 14.36%, 32.42%, and 21.16%, respectively) with A + T contents of 64.48%. Among 13 PCGs, COX1 gene used an unusual initiation codon CAA, COX1, COX2, ND4 and CYTB genes were ended with an incomplete stop codon T, and ND5 gene with an abnormal stop codon ATT. One microsatellite (C)10 was identified in P. longipes mitogenome located in the control region. Phylogenetic tree showed that P. longipes was first clustered with Panulirus cygnus, then together with P. japonicus and P. argus. |
| first_indexed | 2024-03-11T13:10:45Z |
| format | Article |
| id | doaj.art-9543a65bdd5249ac98593a844dfa8331 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:45Z |
| publishDate | 2021-02-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9543a65bdd5249ac98593a844dfa83312023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-02-016266066210.1080/23802359.2021.18789521878952The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868)Hongtao Liu0Liyun Pu1Key Laboratory of Utilization and Conservation for Tropical Marine Bioresources (Hainan Tropical Ocean University), Ministry of EducationHainan Provincial Key Laboratory of Tropical Maricultural Technologies, Hainan Academy of Ocean and Fisheries SciencesIn this study, we first determined and characterized the complete mitochondrial genome of longlegged spiny lobster Panulirus longipes from South China Sea. The P. longipes mitogenome is 15,739 bp long, and consists of 22 tRNA genes, two rRNA genes, 13 protein-coding genes (PCGs), and one control region. The nucleotide composition of P. longipes mitogenome is significantly biased (A, G, T, and C was 32.06%, 14.36%, 32.42%, and 21.16%, respectively) with A + T contents of 64.48%. Among 13 PCGs, COX1 gene used an unusual initiation codon CAA, COX1, COX2, ND4 and CYTB genes were ended with an incomplete stop codon T, and ND5 gene with an abnormal stop codon ATT. One microsatellite (C)10 was identified in P. longipes mitogenome located in the control region. Phylogenetic tree showed that P. longipes was first clustered with Panulirus cygnus, then together with P. japonicus and P. argus.http://dx.doi.org/10.1080/23802359.2021.1878952panulirus longipesmitochondrial genomephylogenetic analysis |
| spellingShingle | Hongtao Liu Liyun Pu The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) Mitochondrial DNA. Part B. Resources panulirus longipes mitochondrial genome phylogenetic analysis |
| title | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
| title_full | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
| title_fullStr | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
| title_full_unstemmed | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
| title_short | The complete mitochondrial genome of longlegged spiny lobster Panulirus longipes (A. Milne Edwards, 1868) |
| title_sort | complete mitochondrial genome of longlegged spiny lobster panulirus longipes a milne edwards 1868 |
| topic | panulirus longipes mitochondrial genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1878952 |
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