Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds

The extraordinary progress experienced by sequencing technologies and bioinformatics has made the development of omic studies virtually ubiquitous in all fields of life sciences nowadays. However, scientific attention has been quite unevenly distributed throughout the different branches of the tree...

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Main Authors: Paola Venier, Marco Gerdol, Juan Fernández-Tajes, Chiara Manfrin, Victoria Suárez-Ulloa, José M. Eirín-López
Format: Article
Language:English
Published: MDPI AG 2013-11-01
Series:Marine Drugs
Subjects:
Online Access:http://www.mdpi.com/1660-3397/11/11/4370
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author Paola Venier
Marco Gerdol
Juan Fernández-Tajes
Chiara Manfrin
Victoria Suárez-Ulloa
José M. Eirín-López
author_facet Paola Venier
Marco Gerdol
Juan Fernández-Tajes
Chiara Manfrin
Victoria Suárez-Ulloa
José M. Eirín-López
author_sort Paola Venier
collection DOAJ
description The extraordinary progress experienced by sequencing technologies and bioinformatics has made the development of omic studies virtually ubiquitous in all fields of life sciences nowadays. However, scientific attention has been quite unevenly distributed throughout the different branches of the tree of life, leaving molluscs, one of the most diverse animal groups, relatively unexplored and without representation within the narrow collection of well established model organisms. Within this Phylum, bivalve molluscs play a fundamental role in the functioning of the marine ecosystem, constitute very valuable commercial resources in aquaculture, and have been widely used as sentinel organisms in the biomonitoring of marine pollution. Yet, it has only been very recently that this complex group of organisms became a preferential subject for omic studies, posing new challenges for their integrative characterization. The present contribution aims to give a detailed insight into the state of the art of the omic studies and functional information analysis of bivalve molluscs, providing a timely perspective on the available data resources and on the current and prospective applications for the biomonitoring of harmful marine compounds.
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spelling doaj.art-974f1299bdec47f59054fe138e2a03382022-12-22T04:09:48ZengMDPI AGMarine Drugs1660-33972013-11-0111114370438910.3390/md11114370Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine CompoundsPaola VenierMarco GerdolJuan Fernández-TajesChiara ManfrinVictoria Suárez-UlloaJosé M. Eirín-LópezThe extraordinary progress experienced by sequencing technologies and bioinformatics has made the development of omic studies virtually ubiquitous in all fields of life sciences nowadays. However, scientific attention has been quite unevenly distributed throughout the different branches of the tree of life, leaving molluscs, one of the most diverse animal groups, relatively unexplored and without representation within the narrow collection of well established model organisms. Within this Phylum, bivalve molluscs play a fundamental role in the functioning of the marine ecosystem, constitute very valuable commercial resources in aquaculture, and have been widely used as sentinel organisms in the biomonitoring of marine pollution. Yet, it has only been very recently that this complex group of organisms became a preferential subject for omic studies, posing new challenges for their integrative characterization. The present contribution aims to give a detailed insight into the state of the art of the omic studies and functional information analysis of bivalve molluscs, providing a timely perspective on the available data resources and on the current and prospective applications for the biomonitoring of harmful marine compounds.http://www.mdpi.com/1660-3397/11/11/4370marine invertebratesomicsbioinformaticspollutionbiomonitoringbiotoxinsheavy metalsPAHs
spellingShingle Paola Venier
Marco Gerdol
Juan Fernández-Tajes
Chiara Manfrin
Victoria Suárez-Ulloa
José M. Eirín-López
Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
Marine Drugs
marine invertebrates
omics
bioinformatics
pollution
biomonitoring
biotoxins
heavy metals
PAHs
title Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
title_full Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
title_fullStr Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
title_full_unstemmed Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
title_short Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds
title_sort bivalve omics state of the art and potential applications for the biomonitoring of harmful marine compounds
topic marine invertebrates
omics
bioinformatics
pollution
biomonitoring
biotoxins
heavy metals
PAHs
url http://www.mdpi.com/1660-3397/11/11/4370
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