Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb
Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. panicula...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1829518 |
| _version_ | 1827772701571284992 |
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| author | Huihui Liu Yuyang Zhao Junhui Zhou Qing Ma Xinhong Wang Zhongyi Hua |
| author_facet | Huihui Liu Yuyang Zhao Junhui Zhou Qing Ma Xinhong Wang Zhongyi Hua |
| author_sort | Huihui Liu |
| collection | DOAJ |
| description | Murraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. paniculata is 160,280 bp in length consisting of large and small single-copy regions of length 87,605 and 18,609 bp, separated by two IR regions of 27,033 bp. The overall GC content was 38.61%. De novo assembly and annotation showed the presence of unique genes with 85 protein-coding genes, 29 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic analysis showed that M. paniculata was closely related to M. caloxylon. |
| first_indexed | 2024-03-11T13:11:48Z |
| format | Article |
| id | doaj.art-97d1529092ec4c9ea0dff2ffd6cd1b63 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:48Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-97d1529092ec4c9ea0dff2ffd6cd1b632023-11-03T14:08:15ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01533678367910.1080/23802359.2020.18295181829518Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herbHuihui Liu0Yuyang Zhao1Junhui Zhou2Qing Ma3Xinhong Wang4Zhongyi Hua5China Resources Sanjiu Medical & Pharmaceutical Co, LtdNational Resource Center for Chinese Materia Medica, China Academy of Chinese Medical SciencesNational Resource Center for Chinese Materia Medica, China Academy of Chinese Medical SciencesChina Resources Sanjiu Medical & Pharmaceutical Co, LtdChina Resources Sanjiu Medical & Pharmaceutical Co, LtdNational Resource Center for Chinese Materia Medica, China Academy of Chinese Medical SciencesMurraya paniculate, is traditionally used for management of gut, air way and cardiovascular disorders. In this study, we sequenced the complete chloroplast genome of M. paniculata based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of M. paniculata is 160,280 bp in length consisting of large and small single-copy regions of length 87,605 and 18,609 bp, separated by two IR regions of 27,033 bp. The overall GC content was 38.61%. De novo assembly and annotation showed the presence of unique genes with 85 protein-coding genes, 29 tRNA genes, and eight rRNA genes. A maximum-likelihood phylogenomic analysis showed that M. paniculata was closely related to M. caloxylon.http://dx.doi.org/10.1080/23802359.2020.1829518chloroplast genomemurraya paniculatagenomic resources |
| spellingShingle | Huihui Liu Yuyang Zhao Junhui Zhou Qing Ma Xinhong Wang Zhongyi Hua Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb Mitochondrial DNA. Part B. Resources chloroplast genome murraya paniculata genomic resources |
| title | Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb |
| title_full | Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb |
| title_fullStr | Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb |
| title_full_unstemmed | Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb |
| title_short | Complete chloroplast genome sequence of Murraya paniculata (Rutaceae): a widely used folk medicinal herb |
| title_sort | complete chloroplast genome sequence of murraya paniculata rutaceae a widely used folk medicinal herb |
| topic | chloroplast genome murraya paniculata genomic resources |
| url | http://dx.doi.org/10.1080/23802359.2020.1829518 |
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