The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)
Bixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1535847 |
| _version_ | 1797640628242219008 |
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| author | Seping Dai Xuwen Li Jianzhong Ni Lin Ruan Renchao Zhou Wei Lun Ng |
| author_facet | Seping Dai Xuwen Li Jianzhong Ni Lin Ruan Renchao Zhou Wei Lun Ng |
| author_sort | Seping Dai |
| collection | DOAJ |
| description | Bixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length of 159,825 bp, the chloroplast genome comprised of a large single-copy (LSC) region of 89,476 bp, a small single-copy (SSC) region of 19,617 bp, and two inverted repeat (IR) regions of 25,356 bp each. A total of 127 genes were predicted, consisting of 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the position of B. orellana within the order Malvales. |
| first_indexed | 2024-03-11T13:33:40Z |
| format | Article |
| id | doaj.art-97e2a735bb734533b0d4f54373e376a3 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:33:40Z |
| publishDate | 2019-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-97e2a735bb734533b0d4f54373e376a32023-11-02T16:07:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-01-0141171810.1080/23802359.2018.15358471535847The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae)Seping Dai0Xuwen Li1Jianzhong Ni2Lin Ruan3Renchao Zhou4Wei Lun Ng5Guangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureGuangzhou Institute of Forestry and Landscape ArchitectureSun Yat-sen UniversitySun Yat-sen UniversityBixa orellana is a small tree known for its red, oil-soluble pigment contained in the seed coat that is used as a natural dye and food coloring. In this study, we assembled and characterized the complete chloroplast genome of B. orellana as a resource for future genetic studies. With a total length of 159,825 bp, the chloroplast genome comprised of a large single-copy (LSC) region of 89,476 bp, a small single-copy (SSC) region of 19,617 bp, and two inverted repeat (IR) regions of 25,356 bp each. A total of 127 genes were predicted, consisting of 83 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis confirmed the position of B. orellana within the order Malvales.http://dx.doi.org/10.1080/23802359.2018.1535847bixaachiotenatural dyecomplete chloroplast genomeautomated assembly |
| spellingShingle | Seping Dai Xuwen Li Jianzhong Ni Lin Ruan Renchao Zhou Wei Lun Ng The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) Mitochondrial DNA. Part B. Resources bixa achiote natural dye complete chloroplast genome automated assembly |
| title | The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) |
| title_full | The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) |
| title_fullStr | The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) |
| title_full_unstemmed | The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) |
| title_short | The complete chloroplast genome of the lipstick tree, Bixa Orellana (Bixaceae) |
| title_sort | complete chloroplast genome of the lipstick tree bixa orellana bixaceae |
| topic | bixa achiote natural dye complete chloroplast genome automated assembly |
| url | http://dx.doi.org/10.1080/23802359.2018.1535847 |
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