Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans
Phytophthora infestans is a devastating pathogen causing potato late blight (Solanum tuberosum). Here we report the sequencing, assembly and genome annotation for two Phytophthora infestans isolates sampled in Republic of Korea. Genome sequencing was carried out using long read (Oxford Nanopore) and...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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The American Phytopathological Society
2020-08-01
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| Series: | Molecular Plant-Microbe Interactions |
| Subjects: | |
| Online Access: | https://apsjournals.apsnet.org/doi/10.1094/MPMI-02-20-0023-A |
| _version_ | 1831546867701252096 |
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| author | Yoonyoung Lee Kwang-Soo Cho Jin-Hee Seo Kee Hoon Sohn Maxim Prokchorchik |
| author_facet | Yoonyoung Lee Kwang-Soo Cho Jin-Hee Seo Kee Hoon Sohn Maxim Prokchorchik |
| author_sort | Yoonyoung Lee |
| collection | DOAJ |
| description | Phytophthora infestans is a devastating pathogen causing potato late blight (Solanum tuberosum). Here we report the sequencing, assembly and genome annotation for two Phytophthora infestans isolates sampled in Republic of Korea. Genome sequencing was carried out using long read (Oxford Nanopore) and short read (Illumina Nextseq) sequencing technologies that significantly improved the contiguity and quality of P. infestans genome assembly. Our resources would help researchers better understand the molecular mechanisms by which P. infestans causes late blight disease in the future. |
| first_indexed | 2024-12-17T01:52:54Z |
| format | Article |
| id | doaj.art-982f14ba6b6549d284c32829097fb342 |
| institution | Directory Open Access Journal |
| issn | 0894-0282 1943-7706 |
| language | English |
| last_indexed | 2024-12-17T01:52:54Z |
| publishDate | 2020-08-01 |
| publisher | The American Phytopathological Society |
| record_format | Article |
| series | Molecular Plant-Microbe Interactions |
| spelling | doaj.art-982f14ba6b6549d284c32829097fb3422022-12-21T22:08:01ZengThe American Phytopathological SocietyMolecular Plant-Microbe Interactions0894-02821943-77062020-08-013381025102810.1094/MPMI-02-20-0023-AImproved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestansYoonyoung Lee0Kwang-Soo Cho1Jin-Hee Seo2Kee Hoon Sohn3Maxim Prokchorchik4Department of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of KoreaPotato Research Team, Highland Agriculture Research Institute, Rural Development Administration, Gangwon 25342, Republic of KoreaPotato Research Team, Highland Agriculture Research Institute, Rural Development Administration, Gangwon 25342, Republic of KoreaDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of KoreaDepartment of Life Sciences, Pohang University of Science and Technology, Pohang 37673, Republic of KoreaPhytophthora infestans is a devastating pathogen causing potato late blight (Solanum tuberosum). Here we report the sequencing, assembly and genome annotation for two Phytophthora infestans isolates sampled in Republic of Korea. Genome sequencing was carried out using long read (Oxford Nanopore) and short read (Illumina Nextseq) sequencing technologies that significantly improved the contiguity and quality of P. infestans genome assembly. Our resources would help researchers better understand the molecular mechanisms by which P. infestans causes late blight disease in the future.https://apsjournals.apsnet.org/doi/10.1094/MPMI-02-20-0023-Agenomicspotato late blightPhytophthora infestansSolanum tuberosum |
| spellingShingle | Yoonyoung Lee Kwang-Soo Cho Jin-Hee Seo Kee Hoon Sohn Maxim Prokchorchik Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans Molecular Plant-Microbe Interactions genomics potato late blight Phytophthora infestans Solanum tuberosum |
| title | Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans |
| title_full | Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans |
| title_fullStr | Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans |
| title_full_unstemmed | Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans |
| title_short | Improved Genome Sequence and Gene Annotation Resource for the Potato Late Blight Pathogen Phytophthora infestans |
| title_sort | improved genome sequence and gene annotation resource for the potato late blight pathogen phytophthora infestans |
| topic | genomics potato late blight Phytophthora infestans Solanum tuberosum |
| url | https://apsjournals.apsnet.org/doi/10.1094/MPMI-02-20-0023-A |
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