The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea
Helicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome i...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2023-08-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2023.2246686 |
| _version_ | 1827772106036740096 |
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| author | Ji-Min Kim Hyung-Seop Kim Chang-Ho Yi |
| author_facet | Ji-Min Kim Hyung-Seop Kim Chang-Ho Yi |
| author_sort | Ji-Min Kim |
| collection | DOAJ |
| description | Helicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome is 16,535 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. A phylogenetic tree was reconstructed using the maximum-likelihood of phylogeny methods. H. japonica formed a sister clade with Helicana wuana, which is another Helicana species. |
| first_indexed | 2024-03-11T13:03:38Z |
| format | Article |
| id | doaj.art-9881d369b6824fd08758af51633f9d8e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:03:38Z |
| publishDate | 2023-08-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9881d369b6824fd08758af51633f9d8e2023-11-03T14:44:08ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-08-018887287610.1080/23802359.2023.22466862246686The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South KoreaJi-Min Kim0Hyung-Seop Kim1Chang-Ho Yi2Department of Ecology and Conservation, Marine Biodiversity Institute of KoreaSchool of Marine Biology, College of Marine Science, Kunsan National UniversityDepartment of Ecology and Conservation, Marine Biodiversity Institute of KoreaHelicana japonica mainly inhabits burrowed holes in the mudflats and intertidal zones. Specimens from the Republic of Korea were collected and whole genomic DNA from the cheliped muscle tissue was extracted. We determined the complete mitochondrial genome using Illumina HiSeq X Ten. The mitogenome is 16,535 bp in length and consists of 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. A phylogenetic tree was reconstructed using the maximum-likelihood of phylogeny methods. H. japonica formed a sister clade with Helicana wuana, which is another Helicana species.http://dx.doi.org/10.1080/23802359.2023.2246686varunidaemitochondrial genomehelicana japonicaphylogeny |
| spellingShingle | Ji-Min Kim Hyung-Seop Kim Chang-Ho Yi The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea Mitochondrial DNA. Part B. Resources varunidae mitochondrial genome helicana japonica phylogeny |
| title | The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea |
| title_full | The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea |
| title_fullStr | The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea |
| title_full_unstemmed | The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea |
| title_short | The complete mitochondrial genome of Helicana japonica (Crustacea, Decapoda, Varunidae) from South Korea |
| title_sort | complete mitochondrial genome of helicana japonica crustacea decapoda varunidae from south korea |
| topic | varunidae mitochondrial genome helicana japonica phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2023.2246686 |
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