The complete chloroplast genome sequence of Davidia involucrata
Davidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1860715 |
| _version_ | 1827772622717321216 |
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| author | Li Ang Hou Zhe |
| author_facet | Li Ang Hou Zhe |
| author_sort | Li Ang |
| collection | DOAJ |
| description | Davidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique to China, a relic plant, and a well-known ornamental plant in the world. It is a national-level protected plant. In this study, the complete chloroplast genome sequence of D. involucrata was characterized from Illumina pair-end sequencing. The chloroplast genome of D. involucrata was 158,118 bp in length, containing a large single-copy (LSC) region of 87,329 bp, a small single-copy (SSC) region of 18,869 bp, and two inverted repeat (IR) regions of 25,960 bp. The overall GC content is 37.80%, while the corresponding values of the LSC, SSC, and IR regions are 36.0%, 31.6%, and 43.1%, respectively. The genome contains 132 complete genes, including 86 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on complete chloroplast genomes showed that D. involucrata and Camptotheca acuminate clustered together as sisters to other related species. |
| first_indexed | 2024-03-11T13:11:50Z |
| format | Article |
| id | doaj.art-993c4e9a1a3e4598b1849ddbe1f237dd |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:50Z |
| publishDate | 2021-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-993c4e9a1a3e4598b1849ddbe1f237dd2023-11-03T14:08:18ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-01-016117117310.1080/23802359.2020.18607151860715The complete chloroplast genome sequence of Davidia involucrataLi Ang0Hou Zhe1Ecological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal UniversityEcological Security and Protection Key Laboratory of Sichuan Province, Mianyang Normal UniversityDavidia involucrata Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. Davidia involucrata has been listed as a national first-level protected wild plant, a unique genus plant unique to China, a relic plant, and a well-known ornamental plant in the world. It is a national-level protected plant. In this study, the complete chloroplast genome sequence of D. involucrata was characterized from Illumina pair-end sequencing. The chloroplast genome of D. involucrata was 158,118 bp in length, containing a large single-copy (LSC) region of 87,329 bp, a small single-copy (SSC) region of 18,869 bp, and two inverted repeat (IR) regions of 25,960 bp. The overall GC content is 37.80%, while the corresponding values of the LSC, SSC, and IR regions are 36.0%, 31.6%, and 43.1%, respectively. The genome contains 132 complete genes, including 86 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis based on complete chloroplast genomes showed that D. involucrata and Camptotheca acuminate clustered together as sisters to other related species.http://dx.doi.org/10.1080/23802359.2020.1860715davidia involucratachloroplast genomephylogenetic analysis |
| spellingShingle | Li Ang Hou Zhe The complete chloroplast genome sequence of Davidia involucrata Mitochondrial DNA. Part B. Resources davidia involucrata chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Davidia involucrata |
| title_full | The complete chloroplast genome sequence of Davidia involucrata |
| title_fullStr | The complete chloroplast genome sequence of Davidia involucrata |
| title_full_unstemmed | The complete chloroplast genome sequence of Davidia involucrata |
| title_short | The complete chloroplast genome sequence of Davidia involucrata |
| title_sort | complete chloroplast genome sequence of davidia involucrata |
| topic | davidia involucrata chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1860715 |
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