Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti
In this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demons...
| Päätekijät: | , , , , , , , |
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| Aineistotyyppi: | Artikkeli |
| Kieli: | English |
| Julkaistu: |
Taylor & Francis Group
2018-07-01
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| Sarja: | Mitochondrial DNA. Part B. Resources |
| Aiheet: | |
| Linkit: | http://dx.doi.org/10.1080/23802359.2018.1483763 |
| _version_ | 1827774233571229696 |
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| author | Tao Wang Yunfang Wang Fengqiang Xu Xia Li Rui Qu Lin Song Yongping Tang Peilin Lin |
| author_facet | Tao Wang Yunfang Wang Fengqiang Xu Xia Li Rui Qu Lin Song Yongping Tang Peilin Lin |
| author_sort | Tao Wang |
| collection | DOAJ |
| description | In this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demonstrating an obvious bias of high AT content (58.4%). The mitochondrial genome contains a typically conserved structure, encoding 12 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4 gene and ND4L gene were overlapped by 39 bp. The nucleotide sequence of 12 PCGs of P. heterotremus and other 10 parasite species were used for phylogenetic analysis. The result indicated P. heterotremus a relative close relationship with species P. westermani (AF219379.2). |
| first_indexed | 2024-03-11T13:34:35Z |
| format | Article |
| id | doaj.art-9a471ded89734c59ad73d453e7fd2d76 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:35Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9a471ded89734c59ad73d453e7fd2d762023-11-02T15:57:24ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013271571610.1080/23802359.2018.14837631483763Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicottiTao Wang0Yunfang Wang1Fengqiang Xu2Xia Li3Rui Qu4Lin Song5Yongping Tang6Peilin Lin7Cardiovascular Disease Hospital Affiliated to Qingdao UniversityQingdao Municipal HospitalQingdao Municipal HospitalCardiovascular Disease Hospital Affiliated to Qingdao UniversityCardiovascular Disease Hospital Affiliated to Qingdao UniversityCardiovascular Disease Hospital Affiliated to Qingdao UniversityQingdao Municipal HospitalCardiovascular Disease Hospital Affiliated to Qingdao UniversityIn this study, the complete mitochondrial genome of human lung fluke, Paragonimus kellicotti, was recovered through Illumina sequencing data. This complete mitochondrial genome of P. kellicotti is 13,927 bp in length and has a base composition of A (16.6%), T (41.8%), C (13.%), and G (28.4%), demonstrating an obvious bias of high AT content (58.4%). The mitochondrial genome contains a typically conserved structure, encoding 12 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (12S rRNA and 16S rRNA), and a control region (D-loop region). All PCGs were located on the H-strand. ND4 gene and ND4L gene were overlapped by 39 bp. The nucleotide sequence of 12 PCGs of P. heterotremus and other 10 parasite species were used for phylogenetic analysis. The result indicated P. heterotremus a relative close relationship with species P. westermani (AF219379.2).http://dx.doi.org/10.1080/23802359.2018.1483763paragonimus kellicottimitochondril genomeassemblyphylogeny |
| spellingShingle | Tao Wang Yunfang Wang Fengqiang Xu Xia Li Rui Qu Lin Song Yongping Tang Peilin Lin Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti Mitochondrial DNA. Part B. Resources paragonimus kellicotti mitochondril genome assembly phylogeny |
| title | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
| title_full | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
| title_fullStr | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
| title_short | Characterization of the complete mitochondrial genome of the lung fluke, Paragonimus kellicotti |
| title_sort | characterization of the complete mitochondrial genome of the lung fluke paragonimus kellicotti |
| topic | paragonimus kellicotti mitochondril genome assembly phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2018.1483763 |
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