Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques
Ten annotated 3D reconstructions of Montipora capitata coral colonies contain x,y,z coordinates for all growth anomaly (GA) lesions affecting these corals. The 3D reconstructions are available as Virtual Reality Modeling Language (VRML) files, and the GA lesions coordinates are in accompanying text...
| Main Authors: | , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2016-12-01
|
| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340916305819 |
| _version_ | 1819041938548981760 |
|---|---|
| author | John H.R. Burns Theodore Alexandrov Katya Ovchinnikova Ruth D. Gates Misaki Takabayashi |
| author_facet | John H.R. Burns Theodore Alexandrov Katya Ovchinnikova Ruth D. Gates Misaki Takabayashi |
| author_sort | John H.R. Burns |
| collection | DOAJ |
| description | Ten annotated 3D reconstructions of Montipora capitata coral colonies contain x,y,z coordinates for all growth anomaly (GA) lesions affecting these corals. The 3D reconstructions are available as Virtual Reality Modeling Language (VRML) files, and the GA lesions coordinates are in accompanying text files. The VRML models and GA lesion coordinates can be spatially analyzed using Matlab. Matlab scripts are provided for three spatial statistical procedures in order to assess clustering of the GA lesions across the coral colony surfaces in a 3D framework: Ripley׳s K, Moran׳s I, and the Kolmogorov–Smirnov test. Please see the research article, “Investigating the spatial distribution of Growth Anomalies affecting Montipora capitata corals in a 3-dimensional framework” (J.H.R. Burns, T. Alexandrov, E. Ovchinnikova, R.D. Gates, M. Takabayashi, 2016) [1], for further interpretation and discussion of the data. |
| first_indexed | 2024-12-21T09:32:57Z |
| format | Article |
| id | doaj.art-9a4f0b1a627e43fdbe158ed1b498b666 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-12-21T09:32:57Z |
| publishDate | 2016-12-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-9a4f0b1a627e43fdbe158ed1b498b6662022-12-21T19:08:42ZengElsevierData in Brief2352-34092016-12-019C46046210.1016/j.dib.2016.09.009Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniquesJohn H.R. Burns0Theodore Alexandrov1Katya Ovchinnikova2Ruth D. Gates3Misaki Takabayashi4Department of Biology, College of Natural Sciences, University of Hawai‘i at Mānoa, 2538 McCarthy Mall, Edmondson Hall Room 216., Honolulu, HI 96822, USAStructural and Computational Biology, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, GermanyStructural and Computational Biology, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, GermanyHawai׳i Institute of Marine Biology, School of Ocean and Earth Science and Technology, University of Hawai׳i, Kāne׳ohe, Hawai׳i 96744, USAMarine Science Department, University of Hawai‘i at Hilo, 200 W. Kawili St., Hilo, HI 96720, USATen annotated 3D reconstructions of Montipora capitata coral colonies contain x,y,z coordinates for all growth anomaly (GA) lesions affecting these corals. The 3D reconstructions are available as Virtual Reality Modeling Language (VRML) files, and the GA lesions coordinates are in accompanying text files. The VRML models and GA lesion coordinates can be spatially analyzed using Matlab. Matlab scripts are provided for three spatial statistical procedures in order to assess clustering of the GA lesions across the coral colony surfaces in a 3D framework: Ripley׳s K, Moran׳s I, and the Kolmogorov–Smirnov test. Please see the research article, “Investigating the spatial distribution of Growth Anomalies affecting Montipora capitata corals in a 3-dimensional framework” (J.H.R. Burns, T. Alexandrov, E. Ovchinnikova, R.D. Gates, M. Takabayashi, 2016) [1], for further interpretation and discussion of the data.http://www.sciencedirect.com/science/article/pii/S2352340916305819 |
| spellingShingle | John H.R. Burns Theodore Alexandrov Katya Ovchinnikova Ruth D. Gates Misaki Takabayashi Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques Data in Brief |
| title | Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques |
| title_full | Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques |
| title_fullStr | Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques |
| title_full_unstemmed | Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques |
| title_short | Data for spatial analysis of growth anomaly lesions on Montipora capitata coral colonies using 3D reconstruction techniques |
| title_sort | data for spatial analysis of growth anomaly lesions on montipora capitata coral colonies using 3d reconstruction techniques |
| url | http://www.sciencedirect.com/science/article/pii/S2352340916305819 |
| work_keys_str_mv | AT johnhrburns dataforspatialanalysisofgrowthanomalylesionsonmontiporacapitatacoralcoloniesusing3dreconstructiontechniques AT theodorealexandrov dataforspatialanalysisofgrowthanomalylesionsonmontiporacapitatacoralcoloniesusing3dreconstructiontechniques AT katyaovchinnikova dataforspatialanalysisofgrowthanomalylesionsonmontiporacapitatacoralcoloniesusing3dreconstructiontechniques AT ruthdgates dataforspatialanalysisofgrowthanomalylesionsonmontiporacapitatacoralcoloniesusing3dreconstructiontechniques AT misakitakabayashi dataforspatialanalysisofgrowthanomalylesionsonmontiporacapitatacoralcoloniesusing3dreconstructiontechniques |