Identification of genome-wide non-canonical spliced regions and analysis of biological functions for spliced sequences using Read-Split-Fly

Identification of genome-wide non-canonical spliced regions and analysis of biological functions for spliced sequences using Read-Split-Fly

Abstract Background It is generally thought that most canonical or non-canonical splicing events involving U2- and U12 spliceosomes occur within nuclear pre-mRNAs. However, the question of whether at least some U12-type splicing occurs in the cytoplasm is still unclear. In recent years next-generati...

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Bibliographic Details
Main Authors: Yongsheng Bai, Jeff Kinne, Lizhong Ding, Ethan C. Rath, Aaron Cox, Siva Dharman Naidu
Format: Article
Language:English
Published: BMC 2017-10-01
Series:BMC Bioinformatics
Subjects:
Read-Split-Fly
Alternative splicing
Non-canonical
RNA-Seq
ENCODE
Online Access:http://link.springer.com/article/10.1186/s12859-017-1801-y

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