The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma
Polygonatum zanlanscianense Pamp. is a plant species of the genus Polygonatum (Asparagaceae) distributed widely in China. The complete chloroplast genome of P. zanlanscianense was sequenced by Illumina sequencing technology. The plastome is 155,609 bp in length with a typical quadripartite structure...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-08-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1945973 |
| _version_ | 1797638815694716928 |
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| author | Naixing Shi Li Li Shuying Wang Zhenyan Yang Guosong Wen |
| author_facet | Naixing Shi Li Li Shuying Wang Zhenyan Yang Guosong Wen |
| author_sort | Naixing Shi |
| collection | DOAJ |
| description | Polygonatum zanlanscianense Pamp. is a plant species of the genus Polygonatum (Asparagaceae) distributed widely in China. The complete chloroplast genome of P. zanlanscianense was sequenced by Illumina sequencing technology. The plastome is 155,609 bp in length with a typical quadripartite structure, including one small single copy (SSC, 18,427 bp), one large copy (LSC, 84,438 bp), and two inverted repeat regions (IRs, 26,372 bp each). The cp genome encoded 132 genes, including 38 tRNA, 8 rRNA, and 86 protein-coding genes. The overall GC content is 37.7%. The ML phylogenetic analysis based on the cp genomes indicated that the genus Polygonatum is sister to the genus Heteropolygonatum within the tribe Polygonateae, P. zanlanscianense is sister to P. cirrhifolium within the genus Polygonatum. This study provides an important theoretical foundation for varieties identification, the phylogenetic relationship of P. zanlanscianense. Furthermore, this article takes a radical reform of Polygonati rhizoma. |
| first_indexed | 2024-03-11T13:08:48Z |
| format | Article |
| id | doaj.art-9aef443aa313446680eba1f8753c9651 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:48Z |
| publishDate | 2021-08-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9aef443aa313446680eba1f8753c96512023-11-03T14:28:28ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-08-01682420242110.1080/23802359.2021.19459731945973The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizomaNaixing Shi0Li Li1Shuying Wang2Zhenyan Yang3Guosong Wen4College of Agronomy and Biotechnology, Yunnan Agricultural UniversityKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of SciencesKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of SciencesKey Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of SciencesCollege of Agronomy and Biotechnology, Yunnan Agricultural UniversityPolygonatum zanlanscianense Pamp. is a plant species of the genus Polygonatum (Asparagaceae) distributed widely in China. The complete chloroplast genome of P. zanlanscianense was sequenced by Illumina sequencing technology. The plastome is 155,609 bp in length with a typical quadripartite structure, including one small single copy (SSC, 18,427 bp), one large copy (LSC, 84,438 bp), and two inverted repeat regions (IRs, 26,372 bp each). The cp genome encoded 132 genes, including 38 tRNA, 8 rRNA, and 86 protein-coding genes. The overall GC content is 37.7%. The ML phylogenetic analysis based on the cp genomes indicated that the genus Polygonatum is sister to the genus Heteropolygonatum within the tribe Polygonateae, P. zanlanscianense is sister to P. cirrhifolium within the genus Polygonatum. This study provides an important theoretical foundation for varieties identification, the phylogenetic relationship of P. zanlanscianense. Furthermore, this article takes a radical reform of Polygonati rhizoma.http://dx.doi.org/10.1080/23802359.2021.1945973polygonatum zanlanscianensecomplete plastomephylogenetic tree |
| spellingShingle | Naixing Shi Li Li Shuying Wang Zhenyan Yang Guosong Wen The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma Mitochondrial DNA. Part B. Resources polygonatum zanlanscianense complete plastome phylogenetic tree |
| title | The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma |
| title_full | The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma |
| title_fullStr | The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma |
| title_full_unstemmed | The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma |
| title_short | The complete chloroplast genome of Polygonatum zanlanscianense (Pampanini, 1915) (Asparagaceae), an adulterants of Polygonati rhizoma |
| title_sort | complete chloroplast genome of polygonatum zanlanscianense pampanini 1915 asparagaceae an adulterants of polygonati rhizoma |
| topic | polygonatum zanlanscianense complete plastome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2021.1945973 |
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