Enhancer RNAs in transcriptional regulation: recent insights

Enhancers are a class of cis-regulatory elements in the genome that instruct the spatiotemporal transcriptional program. Last decade has witnessed an exploration of non-coding transcripts pervasively transcribed from active enhancers in diverse contexts, referred to as enhancer RNAs (eRNAs). Emergin...

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Main Authors: Qi Chen, Yaxin Zeng, Jinjin Kang, Minghui Hu, Nianle Li, Kun Sun, Yu Zhao
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-05-01
Series:Frontiers in Cell and Developmental Biology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fcell.2023.1205540/full
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author Qi Chen
Yaxin Zeng
Jinjin Kang
Minghui Hu
Nianle Li
Kun Sun
Yu Zhao
author_facet Qi Chen
Yaxin Zeng
Jinjin Kang
Minghui Hu
Nianle Li
Kun Sun
Yu Zhao
author_sort Qi Chen
collection DOAJ
description Enhancers are a class of cis-regulatory elements in the genome that instruct the spatiotemporal transcriptional program. Last decade has witnessed an exploration of non-coding transcripts pervasively transcribed from active enhancers in diverse contexts, referred to as enhancer RNAs (eRNAs). Emerging evidence unequivocally suggests eRNAs are an important layer in transcriptional regulation. In this mini-review, we summarize the well-established regulatory models for eRNA actions and highlight the recent insights into the structure and chemical modifications of eRNAs underlying their functions. We also explore the potential roles of eRNAs in transcriptional condensates.
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spelling doaj.art-9b57f57dad254bf1ba7c2469e4d2b9482023-05-17T04:56:23ZengFrontiers Media S.A.Frontiers in Cell and Developmental Biology2296-634X2023-05-011110.3389/fcell.2023.12055401205540Enhancer RNAs in transcriptional regulation: recent insightsQi Chen0Yaxin Zeng1Jinjin Kang2Minghui Hu3Nianle Li4Kun Sun5Yu Zhao6The Eighth Affiliated Hospital, Sun Yat-sen University, Shenzhen, ChinaMolecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, ChinaMolecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, ChinaMolecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, ChinaMolecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, ChinaInstitute of Cancer Research, Shenzhen Bay Laboratory, Shenzhen, ChinaMolecular Cancer Research Center, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, ChinaEnhancers are a class of cis-regulatory elements in the genome that instruct the spatiotemporal transcriptional program. Last decade has witnessed an exploration of non-coding transcripts pervasively transcribed from active enhancers in diverse contexts, referred to as enhancer RNAs (eRNAs). Emerging evidence unequivocally suggests eRNAs are an important layer in transcriptional regulation. In this mini-review, we summarize the well-established regulatory models for eRNA actions and highlight the recent insights into the structure and chemical modifications of eRNAs underlying their functions. We also explore the potential roles of eRNAs in transcriptional condensates.https://www.frontiersin.org/articles/10.3389/fcell.2023.1205540/fulleRNAtranscriptional regulationchromatin loopingphase separationepitranscriptome
spellingShingle Qi Chen
Yaxin Zeng
Jinjin Kang
Minghui Hu
Nianle Li
Kun Sun
Yu Zhao
Enhancer RNAs in transcriptional regulation: recent insights
Frontiers in Cell and Developmental Biology
eRNA
transcriptional regulation
chromatin looping
phase separation
epitranscriptome
title Enhancer RNAs in transcriptional regulation: recent insights
title_full Enhancer RNAs in transcriptional regulation: recent insights
title_fullStr Enhancer RNAs in transcriptional regulation: recent insights
title_full_unstemmed Enhancer RNAs in transcriptional regulation: recent insights
title_short Enhancer RNAs in transcriptional regulation: recent insights
title_sort enhancer rnas in transcriptional regulation recent insights
topic eRNA
transcriptional regulation
chromatin looping
phase separation
epitranscriptome
url https://www.frontiersin.org/articles/10.3389/fcell.2023.1205540/full
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AT yaxinzeng enhancerrnasintranscriptionalregulationrecentinsights
AT jinjinkang enhancerrnasintranscriptionalregulationrecentinsights
AT minghuihu enhancerrnasintranscriptionalregulationrecentinsights
AT nianleli enhancerrnasintranscriptionalregulationrecentinsights
AT kunsun enhancerrnasintranscriptionalregulationrecentinsights
AT yuzhao enhancerrnasintranscriptionalregulationrecentinsights