Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives

Food crop production and quality are two major attributes that ensure food security. Rice is one of the major sources of food that feeds half of the world’s population. Therefore, to feed about 10 billion people by 2050, there is a need to develop high-yielding grain quality of rice varieties, with...

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Main Authors: Javaria Tabassum, Shakeel Ahmad, Babar Hussain, Amos Musyoki Mawia, Aqib Zeb, Luo Ju
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:Agronomy
Subjects:
Online Access:https://www.mdpi.com/2073-4395/11/7/1359
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author Javaria Tabassum
Shakeel Ahmad
Babar Hussain
Amos Musyoki Mawia
Aqib Zeb
Luo Ju
author_facet Javaria Tabassum
Shakeel Ahmad
Babar Hussain
Amos Musyoki Mawia
Aqib Zeb
Luo Ju
author_sort Javaria Tabassum
collection DOAJ
description Food crop production and quality are two major attributes that ensure food security. Rice is one of the major sources of food that feeds half of the world’s population. Therefore, to feed about 10 billion people by 2050, there is a need to develop high-yielding grain quality of rice varieties, with greater pace. Although conventional and mutation breeding techniques have played a significant role in the development of desired varieties in the past, due to certain limitations, these techniques cannot fulfill the high demands for food in the present era. However, rice production and grain quality can be improved by employing new breeding techniques, such as genome editing tools (GETs), with high efficiency. These tools, including clustered, regularly interspaced short palindromic repeats (CRISPR) systems, have revolutionized rice breeding. The protocol of CRISPR/Cas9 systems technology, and its variants, are the most reliable and efficient, and have been established in rice crops. New GETs, such as CRISPR/Cas12, and base editors, have also been applied to rice to improve it. Recombinases and prime editing tools have the potential to make edits more precisely and efficiently. Briefly, in this review, we discuss advancements made in CRISPR systems, base and prime editors, and their applications, to improve rice grain yield, abiotic stress tolerance, grain quality, disease and herbicide resistance, in addition to the regulatory aspects and risks associated with genetically modified rice plants. We also focus on the limitations and future prospects of GETs to improve rice grain quality.
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spelling doaj.art-9b5db17d6f9f44c09ae68a78ee3ce1962023-11-22T02:57:55ZengMDPI AGAgronomy2073-43952021-07-01117135910.3390/agronomy11071359Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future PerspectivesJavaria Tabassum0Shakeel Ahmad1Babar Hussain2Amos Musyoki Mawia3Aqib Zeb4Luo Ju5State Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, ChinaState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, ChinaDepartment of Biological Sciences, Middle East Technical University, 06800 Ankara, TurkeyState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, ChinaState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, ChinaState Key Laboratory of Rice Biology, China National Rice Research Institute, Hangzhou 310006, ChinaFood crop production and quality are two major attributes that ensure food security. Rice is one of the major sources of food that feeds half of the world’s population. Therefore, to feed about 10 billion people by 2050, there is a need to develop high-yielding grain quality of rice varieties, with greater pace. Although conventional and mutation breeding techniques have played a significant role in the development of desired varieties in the past, due to certain limitations, these techniques cannot fulfill the high demands for food in the present era. However, rice production and grain quality can be improved by employing new breeding techniques, such as genome editing tools (GETs), with high efficiency. These tools, including clustered, regularly interspaced short palindromic repeats (CRISPR) systems, have revolutionized rice breeding. The protocol of CRISPR/Cas9 systems technology, and its variants, are the most reliable and efficient, and have been established in rice crops. New GETs, such as CRISPR/Cas12, and base editors, have also been applied to rice to improve it. Recombinases and prime editing tools have the potential to make edits more precisely and efficiently. Briefly, in this review, we discuss advancements made in CRISPR systems, base and prime editors, and their applications, to improve rice grain yield, abiotic stress tolerance, grain quality, disease and herbicide resistance, in addition to the regulatory aspects and risks associated with genetically modified rice plants. We also focus on the limitations and future prospects of GETs to improve rice grain quality.https://www.mdpi.com/2073-4395/11/7/1359ricegrain yieldabiotic stressbiotic stressgrain qualityfood security
spellingShingle Javaria Tabassum
Shakeel Ahmad
Babar Hussain
Amos Musyoki Mawia
Aqib Zeb
Luo Ju
Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
Agronomy
rice
grain yield
abiotic stress
biotic stress
grain quality
food security
title Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
title_full Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
title_fullStr Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
title_full_unstemmed Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
title_short Applications and Potential of Genome-Editing Systems in Rice Improvement: Current and Future Perspectives
title_sort applications and potential of genome editing systems in rice improvement current and future perspectives
topic rice
grain yield
abiotic stress
biotic stress
grain quality
food security
url https://www.mdpi.com/2073-4395/11/7/1359
work_keys_str_mv AT javariatabassum applicationsandpotentialofgenomeeditingsystemsinriceimprovementcurrentandfutureperspectives
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AT amosmusyokimawia applicationsandpotentialofgenomeeditingsystemsinriceimprovementcurrentandfutureperspectives
AT aqibzeb applicationsandpotentialofgenomeeditingsystemsinriceimprovementcurrentandfutureperspectives
AT luoju applicationsandpotentialofgenomeeditingsystemsinriceimprovementcurrentandfutureperspectives