Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal

Livestock-associated methicillin-resistant <i>Staphylococcus aureus</i> (LA-MRSA) ST398 is mainly found in Europe and North America, colonizing the nasal cavity of pigs. This study characterized the MRSA isolates recovered from pig nasal swabs (<i>n</i> = 171) by evaluating t...

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Main Authors: Célia Leão, Lurdes Clemente, Maria Cara d’Anjo, Teresa Albuquerque, Ana Amaro
Format: Article
Language:English
Published: MDPI AG 2022-10-01
Series:Antibiotics
Subjects:
Online Access:https://www.mdpi.com/2079-6382/11/10/1439
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author Célia Leão
Lurdes Clemente
Maria Cara d’Anjo
Teresa Albuquerque
Ana Amaro
author_facet Célia Leão
Lurdes Clemente
Maria Cara d’Anjo
Teresa Albuquerque
Ana Amaro
author_sort Célia Leão
collection DOAJ
description Livestock-associated methicillin-resistant <i>Staphylococcus aureus</i> (LA-MRSA) ST398 is mainly found in Europe and North America, colonizing the nasal cavity of pigs. This study characterized the MRSA isolates recovered from pig nasal swabs (<i>n</i> = 171) by evaluating the antimicrobial susceptibility profile by broth microdilution and characterizing the genetic lineages by <i>spa</i>-typing. Three linezolid-resistant isolates were subjected to Whole-Genome Sequencing (WGS). All strains harbored the <i>mecA</i> gene and were resistant to tetracycline and susceptible to vancomycin. A high frequency of multidrug resistance (97.6%) was evidenced, with 55 different multidrug resistance profiles identified. The MRSA strains were found to belong to 17 <i>spa</i>-types, three being novel. The linezolid-resistant strains appeared to belong to the ST398 type, <i>spa</i>-type t011, and SCC<i>mec</i>_type_Vc and to harbor the <i>cfr</i>, <i>fex</i>A, <i>bla</i>Z, <i>mec</i>A, <i>tet</i>M, and <i>tet</i>K genes. The <i>cfr</i> gene was predicted to be carried in the plasmid, flanked by <i>IS</i>Sau9 and the transposon TnpR. MRSA from Portuguese fattening pigs present a high diversity of genetic lineages. The presence of <i>cfr</i>-positive LA-MRSA may represent a risk of transmission to humans, mainly to those in contact with livestock.
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spelling doaj.art-9bdcdc804d59408b9f68e39586dd18bd2023-11-23T22:36:26ZengMDPI AGAntibiotics2079-63822022-10-011110143910.3390/antibiotics11101439Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in PortugalCélia Leão0Lurdes Clemente1Maria Cara d’Anjo2Teresa Albuquerque3Ana Amaro4Laboratory of Bacteriology and Mycology, National Institute of Agrarian and Veterinary Research (INIAV, IP), 2780-157 Oeiras, PortugalLaboratory of Bacteriology and Mycology, National Institute of Agrarian and Veterinary Research (INIAV, IP), 2780-157 Oeiras, PortugalDGAV-Portuguese National Authority for Animal Health, 1700-093 Lisbon, PortugalLaboratory of Bacteriology and Mycology, National Institute of Agrarian and Veterinary Research (INIAV, IP), 2780-157 Oeiras, PortugalLaboratory of Bacteriology and Mycology, National Institute of Agrarian and Veterinary Research (INIAV, IP), 2780-157 Oeiras, PortugalLivestock-associated methicillin-resistant <i>Staphylococcus aureus</i> (LA-MRSA) ST398 is mainly found in Europe and North America, colonizing the nasal cavity of pigs. This study characterized the MRSA isolates recovered from pig nasal swabs (<i>n</i> = 171) by evaluating the antimicrobial susceptibility profile by broth microdilution and characterizing the genetic lineages by <i>spa</i>-typing. Three linezolid-resistant isolates were subjected to Whole-Genome Sequencing (WGS). All strains harbored the <i>mecA</i> gene and were resistant to tetracycline and susceptible to vancomycin. A high frequency of multidrug resistance (97.6%) was evidenced, with 55 different multidrug resistance profiles identified. The MRSA strains were found to belong to 17 <i>spa</i>-types, three being novel. The linezolid-resistant strains appeared to belong to the ST398 type, <i>spa</i>-type t011, and SCC<i>mec</i>_type_Vc and to harbor the <i>cfr</i>, <i>fex</i>A, <i>bla</i>Z, <i>mec</i>A, <i>tet</i>M, and <i>tet</i>K genes. The <i>cfr</i> gene was predicted to be carried in the plasmid, flanked by <i>IS</i>Sau9 and the transposon TnpR. MRSA from Portuguese fattening pigs present a high diversity of genetic lineages. The presence of <i>cfr</i>-positive LA-MRSA may represent a risk of transmission to humans, mainly to those in contact with livestock.https://www.mdpi.com/2079-6382/11/10/1439LA-MRSApigslinezolid resistance<i>cfr</i> geneWGSST398
spellingShingle Célia Leão
Lurdes Clemente
Maria Cara d’Anjo
Teresa Albuquerque
Ana Amaro
Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
Antibiotics
LA-MRSA
pigs
linezolid resistance
<i>cfr</i> gene
WGS
ST398
title Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
title_full Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
title_fullStr Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
title_full_unstemmed Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
title_short Emergence of <i>Cfr</i>-Mediated Linezolid Resistance among Livestock-Associated Methicillin-Resistant <i>Staphylococcus aureus</i> (LA-MRSA) from Healthy Pigs in Portugal
title_sort emergence of i cfr i mediated linezolid resistance among livestock associated methicillin resistant i staphylococcus aureus i la mrsa from healthy pigs in portugal
topic LA-MRSA
pigs
linezolid resistance
<i>cfr</i> gene
WGS
ST398
url https://www.mdpi.com/2079-6382/11/10/1439
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