Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China
Acer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in le...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.2017369 |
| _version_ | 1797638650403487744 |
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| author | Qiaoyun Liu Ao Wang Yongwei Gao Liangcheng Zhao |
| author_facet | Qiaoyun Liu Ao Wang Yongwei Gao Liangcheng Zhao |
| author_sort | Qiaoyun Liu |
| collection | DOAJ |
| description | Acer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in length; it contained a large single copy region (85,890 bp) and a small single copy region (18,100 bp), which were separated by a pair of 25,856-bp inverted repeat regions. A total of 128 genes were predicted, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. A phylogenetic analysis of 23 chloroplast genome sequences from the genus Acer revealed that A. leipoense was closely related to A. yangbiense. |
| first_indexed | 2024-03-11T13:06:41Z |
| format | Article |
| id | doaj.art-9c07e3c4ba03409090e10f935c32cc83 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:06:41Z |
| publishDate | 2022-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9c07e3c4ba03409090e10f935c32cc832023-11-03T14:36:01ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-01-017117217410.1080/23802359.2021.20173692017369Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest ChinaQiaoyun Liu0Ao Wang1Yongwei Gao2Liangcheng Zhao3School of Ecology and Nature Conservation, Beijing Forestry UniversitySchool of Ecology and Nature Conservation, Beijing Forestry UniversitySchool of Ecology and Nature Conservation, Beijing Forestry UniversitySchool of Ecology and Nature Conservation, Beijing Forestry UniversityAcer leipoense is a rare and endangered species of the Sapindaceae with a very restricted distribution in Sichuan, China. In this study, the complete chloroplast genome of A. leipoense was characterized by de novo assembly using high-throughput sequencing. The chloroplast genome was 155,702 bp in length; it contained a large single copy region (85,890 bp) and a small single copy region (18,100 bp), which were separated by a pair of 25,856-bp inverted repeat regions. A total of 128 genes were predicted, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. A phylogenetic analysis of 23 chloroplast genome sequences from the genus Acer revealed that A. leipoense was closely related to A. yangbiense.http://dx.doi.org/10.1080/23802359.2021.2017369acer leipoensechloroplast genomeendangeredphylogenysapindaceae |
| spellingShingle | Qiaoyun Liu Ao Wang Yongwei Gao Liangcheng Zhao Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China Mitochondrial DNA. Part B. Resources acer leipoense chloroplast genome endangered phylogeny sapindaceae |
| title | Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China |
| title_full | Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China |
| title_fullStr | Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China |
| title_full_unstemmed | Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China |
| title_short | Complete chloroplast genome and phylogenetic analysis of Acer leipoense (Sapindaceae), a rare plant from Southwest China |
| title_sort | complete chloroplast genome and phylogenetic analysis of acer leipoense sapindaceae a rare plant from southwest china |
| topic | acer leipoense chloroplast genome endangered phylogeny sapindaceae |
| url | http://dx.doi.org/10.1080/23802359.2021.2017369 |
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