A White Campion (<it>Silene latifolia</it>) floral expressed sequence tag (EST) library: annotation, EST-SSR characterization, transferability, and utility for comparative mapping

A White Campion (<it>Silene latifolia</it>) floral expressed sequence tag (EST) library: annotation, EST-SSR characterization, transferability, and utility for comparative mapping

<p>Abstract</p> <p>Background</p> <p>Expressed sequence tag (EST) databases represent a valuable resource for the identification of genes in organisms with uncharacterized genomes and for development of molecular markers. One class of markers derived from EST sequences...

Full description

Bibliographic Details
Main Authors:	Marais Gabriel AB, Oger-Desfeux Christine, Moccia Maria, Widmer Alex
Format:	Article
Language:	English
Published:	BMC 2009-05-01
Series:	BMC Genomics
Online Access:	http://www.biomedcentral.com/1471-2164/10/243

Similar Items

Comparative high-throughput transcriptome sequencing and development of SiESTa, the <it>Silene </it>EST annotation database
by: Marais Gabriel AB, et al.
Published: (2011-07-01)

Structure and evolution of <it>Apetala3</it>, a sex-linked gene in <it>Silene latifolia</it>
by: Cegan Radim, et al.
Published: (2010-08-01)

Development of EST-SSR markers and association mapping with floral traits in Syringa oblata
by: Yunyao Yang, et al.
Published: (2020-09-01)

The location of the pseudoautosomal boundary in Silene latifolia
by: Krasovec, M, et al.
Published: (2020)

Two novel PCR-based assays for sexing of Silene latifolia and Silene dioica plants
by: Anna M. Hewett, et al.
Published: (2024-06-01)

Rapid de novo evolution of X chromosome dosage compensation in Silene latifolia, a plant with young sex chromosomes.
by: Aline Muyle, et al.
Published: (2012-01-01)

Isolation of oil palm floral expressed sequence tags (ESTs) for the development of a floral cDNA chip
by: Kulaveerasingam, Harikrishna, et al.

The mutation rate and the age of the sex chromosomes in Silene latifolia
by: Krasovec, M, et al.
Published: (2018)

Dynamic gene order on the Silene latifolia y chromosome
by: Howell, E, et al.
Published: (2011)

Defining regions and rearrangements of the Silene latifolia Y chromosome.
by: Bergero, R, et al.
Published: (2008)

Dynamic gene order on the Silene latifolia Y chromosome.
by: Howell, E, et al.
Published: (2011)

The Location of the Pseudoautosomal Boundary in <i>Silene latifolia</i>
by: Marc Krasovec, et al.
Published: (2020-05-01)

Sex‐specific natural selection on SNPs in Silene latifolia
by: Lynda F. Delph, et al.
Published: (2022-08-01)

The X chromosome is necessary for ovule production in Silene latifolia.
by: Paris Veltsos, et al.
Published: (2019-01-01)

Development of expressed sequence tag resources for Vanda Mimi Palmer and data mining for EST-SSR
by: Teh, Seow Ling, et al.
Published: (2011)

DNA diversity in sex-linked and autosomal genes of the plant species Silene latifolia and Silene dioica.
by: Filatov, D, et al.
Published: (2001)

Silene isabellae (Caryophyllaceae), a new campion species from serpentine soils of Albania
by: Federico Selvi, et al.
Published: (2023-06-01)

Characterization of EST‑SSR markers in bread wheat EST related to drought tolerance and functional analysis of SSR‑containing unigenes
by: Laila Dabab Nahas, et al.
Published: (2020-05-01)

Isolation of Expressed Sequence Tags (Ests) from an Oil Palm (Elaeis Guineensis Jacq.) Male and Female Floral cDNA Library
by: Choi, Mei Chooi
Published: (2003)

Glacial refugia in pathogens: European genetic structure of anther smut pathogens on Silene latifolia and Silene dioica.
by: Elodie Vercken, et al.
Published: (2010-12-01)

Development and Application of Est-Ssr Markers in Quails
by: JY Bai, et al.

Genetic diversity in soybean germplasm identified by SSR and EST-SSR markers Diversidade genética em germoplasma de soja identificada por marcadores SSR e EST-SSR
by: Bruno Mello Mulato, et al.
Published: (2010-03-01)

Comparative analysis of a plant pseudoautosomal region (PAR) in <it>Silene latifolia</it> with the corresponding <it>S. vulgaris</it> autosome
by: Blavet Nicolas, et al.
Published: (2012-06-01)

Seed shape and size of Silene latifolia, differences between sexes, and influence of the parental genome in hybrids with Silene dioica
by: Hubinský Marcel, et al.
Published: (2024-03-01)

A Catalogue of Oil Palm Expressed Sequence Tags (Ests) From A Floral Cdna Library and the Analysis Of Two Mads Box Genes
by: Kwan, Yen Yen
Published: (2004)

Expressed sequence tags (ESTs) and simple sequence repeat (SSR) markers from octoploid strawberry <it>(Fragaria </it>× <it>ananassa)</it>
by: Bies Dawn H, et al.
Published: (2005-06-01)

Development and characterization of EST‐SSR markers for Camellia reticulata
by: Yan Tong, et al.
Published: (2020-05-01)

Identification and validation of novel EST-SSR markers in olives
by: Alenka Baruca Arbeiter, et al.

Determinants of genetic structure in a nonequilibrium metapopulation of the plant Silene latifolia.
by: Peter D Fields, et al.
Published: (2014-01-01)

CitEST libraries
by: Maria Luísa P. Natividade Targon, et al.
Published: (2007-01-01)

Cross species transferability of G-SSR and EST-SSR markers to Neltuma affinis Spreng.
by: María C. Soldati, et al.
Published: (2023-12-01)

On flavonoid accumulation in different plant parts: Variation patterns among individuals and populations in the shore campion (Silene littorea).
by: Jose Carlos Del Valle, et al.
Published: (2015-10-01)

Immediate dosage compensation is triggered by deletion of Y-linked genes in Silene latifolia
by: Krasovec, M, et al.
Published: (2019)

The origin and evolution of sex chromosomes, revealed by sequencing of the Silene latifolia female genome
by: Yue, J, et al.
Published: (2023)

Substitution rates in the X- and Y-linked genes of the plants, Silene latifolia and S. dioica.
by: Filatov, D, et al.
Published: (2002)

DNA methylation and genetic degeneration of the Y chromosome in the dioecious plant Silene latifolia
by: José Luis Rodríguez Lorenzo, et al.
Published: (2018-07-01)

The Formation of Sex Chromosomes in Silene latifolia and S. dioica Was Accompanied by Multiple Chromosomal Rearrangements
by: Václav Bačovský, et al.
Published: (2020-02-01)

Isolation and identification of EST‐SSR markers in Ixonanthes chinensis (Ixonanthaceae)
by: Wei Guo, et al.
Published: (2019-05-01)

Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in <it>Jatropha Curcas L.</it>
by: Lu Cheng, et al.
Published: (2010-02-01)

Expressed Sequence Tag-Simple Sequence Repeat (EST-SSR) Marker Resources for Diversity Analysis of Mango (Mangifera indica L.)
by: Natalie L. Dillon, et al.
Published: (2014-01-01)