16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria
This study provides sequence datasets of endophytic and rhizobacteria of jute using 16S rRNA gene sequencing. The plant samples were first surface sterilized and DNA of the bacteria from soil and jute roots and stem was extracted using Quick-DNA™ Fungal/Bacterial Miniprep Kit. The purified DNA was a...
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| Format: | Article |
| Language: | English |
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Elsevier
2024-06-01
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| Series: | Data in Brief |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340924002555 |
| _version_ | 1797268989751066624 |
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| author | Bartholomew Saanu Adeleke |
| author_facet | Bartholomew Saanu Adeleke |
| author_sort | Bartholomew Saanu Adeleke |
| collection | DOAJ |
| description | This study provides sequence datasets of endophytic and rhizobacteria of jute using 16S rRNA gene sequencing. The plant samples were first surface sterilized and DNA of the bacteria from soil and jute roots and stem was extracted using Quick-DNA™ Fungal/Bacterial Miniprep Kit. The purified DNA was amplified and subjected to polymerase chain reaction using forward and reverse primers. The PCR products were sequenced on Applied Biosystems ABI 3500XL Genetic Analyser (Applied Biosystems, ThermoFisher Scientific). The sequences were analyzed using BioEdit version 7.2.5 and then BLAST on NCBI. The identifiable bacteria include the rhizobacteria, Citrobacter fruendii RZS23 (accession number: CP024673.1), endophytic bacteria, Bacillus cereus EDR23 (accession number: LN890242.1), and Morganella morganii EDS23 (accession number: KR094121.1). The plant growth-promoting traits exhibited by these bacteria suggest their future exploration as bioinoculants. |
| first_indexed | 2024-04-25T01:41:15Z |
| format | Article |
| id | doaj.art-9d30626b40424fc08008ee10fc45821f |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-04-25T01:41:15Z |
| publishDate | 2024-06-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-9d30626b40424fc08008ee10fc45821f2024-03-08T05:18:53ZengElsevierData in Brief2352-34092024-06-015411028616S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, NigeriaBartholomew Saanu Adeleke0Department of Biological Sciences, Microbiology Unit, School of Science, Olusegun Agagu University of Science and Technology, PMB 353, Okitipupa, NigeriaThis study provides sequence datasets of endophytic and rhizobacteria of jute using 16S rRNA gene sequencing. The plant samples were first surface sterilized and DNA of the bacteria from soil and jute roots and stem was extracted using Quick-DNA™ Fungal/Bacterial Miniprep Kit. The purified DNA was amplified and subjected to polymerase chain reaction using forward and reverse primers. The PCR products were sequenced on Applied Biosystems ABI 3500XL Genetic Analyser (Applied Biosystems, ThermoFisher Scientific). The sequences were analyzed using BioEdit version 7.2.5 and then BLAST on NCBI. The identifiable bacteria include the rhizobacteria, Citrobacter fruendii RZS23 (accession number: CP024673.1), endophytic bacteria, Bacillus cereus EDR23 (accession number: LN890242.1), and Morganella morganii EDS23 (accession number: KR094121.1). The plant growth-promoting traits exhibited by these bacteria suggest their future exploration as bioinoculants.http://www.sciencedirect.com/science/article/pii/S2352340924002555Blue economyCoastal-line agricultural resourcesCrop improvementEndophytic microorganismsStaple food crops |
| spellingShingle | Bartholomew Saanu Adeleke 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria Data in Brief Blue economy Coastal-line agricultural resources Crop improvement Endophytic microorganisms Staple food crops |
| title | 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria |
| title_full | 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria |
| title_fullStr | 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria |
| title_full_unstemmed | 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria |
| title_short | 16S rRNA gene sequencing data of plant growth-promoting jute-associated endophytic and rhizobacteria from coastal-environment of Ondo State, Nigeria |
| title_sort | 16s rrna gene sequencing data of plant growth promoting jute associated endophytic and rhizobacteria from coastal environment of ondo state nigeria |
| topic | Blue economy Coastal-line agricultural resources Crop improvement Endophytic microorganisms Staple food crops |
| url | http://www.sciencedirect.com/science/article/pii/S2352340924002555 |
| work_keys_str_mv | AT bartholomewsaanuadeleke 16srrnagenesequencingdataofplantgrowthpromotingjuteassociatedendophyticandrhizobacteriafromcoastalenvironmentofondostatenigeria |