Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri

Environmental factors such as diet, gut microbiota, and infections have proven to have a significant role in epigenetic modifications. It is known that epigenetic modifications may cause behavioral and neuronal changes observed in neurodevelopmental disabilities, including fragile X syndrome (FXS) a...

Full description

Bibliographic Details
Main Authors: Reem R. AlOlaby, Marwa Zafarullah, Mariana Barboza, Gang Peng, Bernard J. Varian, Susan E. Erdman, Carlito Lebrilla, Flora Tassone
Format: Article
Language:English
Published: MDPI AG 2022-07-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/13/8/1300
_version_ 1797410106228342784
author Reem R. AlOlaby
Marwa Zafarullah
Mariana Barboza
Gang Peng
Bernard J. Varian
Susan E. Erdman
Carlito Lebrilla
Flora Tassone
author_facet Reem R. AlOlaby
Marwa Zafarullah
Mariana Barboza
Gang Peng
Bernard J. Varian
Susan E. Erdman
Carlito Lebrilla
Flora Tassone
author_sort Reem R. AlOlaby
collection DOAJ
description Environmental factors such as diet, gut microbiota, and infections have proven to have a significant role in epigenetic modifications. It is known that epigenetic modifications may cause behavioral and neuronal changes observed in neurodevelopmental disabilities, including fragile X syndrome (FXS) and autism (ASD). Probiotics are live microorganisms that provide health benefits when consumed, and in some cases are shown to decrease the chance of developing neurological disorders. Here, we examined the epigenetic outcomes in offspring mice after feeding of a probiotic organism, <i>Lactobacillus reuteri</i> (<i>L. reuteri</i>), to pregnant mother animals. In this study, we tested a cohort of Western diet-fed descendant mice exhibiting a high frequency of behavioral features and lower FMRP protein expression similar to what is observed in FXS in humans (described in a companion manuscript in this same GENES special topic issue). By investigating 17,735 CpG sites spanning the whole mouse genome, we characterized the epigenetic profile in two cohorts of mice descended from mothers treated and non-treated with <i>L. reuteri</i> to determine the effect of prenatal probiotic exposure on the prevention of FXS-like symptoms. We found several genes involved in different neurological pathways being differentially methylated (<i>p</i> ≤ 0.05) between the cohorts. Among the key functions, synaptogenesis, neurogenesis, synaptic modulation, synaptic transmission, reelin signaling pathway, promotion of specification and maturation of neurons, and long-term potentiation were observed. The results of this study are relevant as they could lead to a better understanding of the pathways involved in these disorders, to novel therapeutics approaches, and to the identification of potential biomarkers for early detection of these conditions.
first_indexed 2024-03-09T04:25:04Z
format Article
id doaj.art-9e7fe55253cb46bdaef54d066d4e00b4
institution Directory Open Access Journal
issn 2073-4425
language English
last_indexed 2024-03-09T04:25:04Z
publishDate 2022-07-01
publisher MDPI AG
record_format Article
series Genes
spelling doaj.art-9e7fe55253cb46bdaef54d066d4e00b42023-12-03T13:42:27ZengMDPI AGGenes2073-44252022-07-01138130010.3390/genes13081300Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus ReuteriReem R. AlOlaby0Marwa Zafarullah1Mariana Barboza2Gang Peng3Bernard J. Varian4Susan E. Erdman5Carlito Lebrilla6Flora Tassone7Department of Mathematics & Sciences, College of Health Sciences, California Northstate University, Sacramento, CA 95670, USABiochemistry and Molecular Medicine, University of California, Davis, Sacramento, CA 95817, USABiochemistry and Molecular Medicine, University of California, Davis, Sacramento, CA 95817, USADepartment of Biostatistics, Yale University School of Public Health, New Haven, CT 06510, USADivision of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA 02139, USADivision of Comparative Medicine, Massachusetts Institute of Technology, Cambridge, MA 02139, USABiochemistry and Molecular Medicine, University of California, Davis, Sacramento, CA 95817, USABiochemistry and Molecular Medicine, University of California, Davis, Sacramento, CA 95817, USAEnvironmental factors such as diet, gut microbiota, and infections have proven to have a significant role in epigenetic modifications. It is known that epigenetic modifications may cause behavioral and neuronal changes observed in neurodevelopmental disabilities, including fragile X syndrome (FXS) and autism (ASD). Probiotics are live microorganisms that provide health benefits when consumed, and in some cases are shown to decrease the chance of developing neurological disorders. Here, we examined the epigenetic outcomes in offspring mice after feeding of a probiotic organism, <i>Lactobacillus reuteri</i> (<i>L. reuteri</i>), to pregnant mother animals. In this study, we tested a cohort of Western diet-fed descendant mice exhibiting a high frequency of behavioral features and lower FMRP protein expression similar to what is observed in FXS in humans (described in a companion manuscript in this same GENES special topic issue). By investigating 17,735 CpG sites spanning the whole mouse genome, we characterized the epigenetic profile in two cohorts of mice descended from mothers treated and non-treated with <i>L. reuteri</i> to determine the effect of prenatal probiotic exposure on the prevention of FXS-like symptoms. We found several genes involved in different neurological pathways being differentially methylated (<i>p</i> ≤ 0.05) between the cohorts. Among the key functions, synaptogenesis, neurogenesis, synaptic modulation, synaptic transmission, reelin signaling pathway, promotion of specification and maturation of neurons, and long-term potentiation were observed. The results of this study are relevant as they could lead to a better understanding of the pathways involved in these disorders, to novel therapeutics approaches, and to the identification of potential biomarkers for early detection of these conditions.https://www.mdpi.com/2073-4425/13/8/1300FXSin uteromethylationepigenetics<i>Lactobacillus reuteri</i>ASD
spellingShingle Reem R. AlOlaby
Marwa Zafarullah
Mariana Barboza
Gang Peng
Bernard J. Varian
Susan E. Erdman
Carlito Lebrilla
Flora Tassone
Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
Genes
FXS
in utero
methylation
epigenetics
<i>Lactobacillus reuteri</i>
ASD
title Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
title_full Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
title_fullStr Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
title_full_unstemmed Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
title_short Differential Methylation Profile in Fragile X Syndrome-Prone Offspring Mice after in Utero Exposure to Lactobacillus Reuteri
title_sort differential methylation profile in fragile x syndrome prone offspring mice after in utero exposure to lactobacillus reuteri
topic FXS
in utero
methylation
epigenetics
<i>Lactobacillus reuteri</i>
ASD
url https://www.mdpi.com/2073-4425/13/8/1300
work_keys_str_mv AT reemralolaby differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT marwazafarullah differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT marianabarboza differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT gangpeng differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT bernardjvarian differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT susaneerdman differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT carlitolebrilla differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri
AT floratassone differentialmethylationprofileinfragilexsyndromeproneoffspringmiceafterinuteroexposuretolactobacillusreuteri