The complete chloroplast genome of Agave sisalana
Agave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with...
| Main Authors: | , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2021-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1935345 |
| _version_ | 1797638884014686208 |
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| author | Xinli Yang Xing Huang Shibei Tan Tao Chen Xu Qin Helong Chen Jingen Xi Kexian Yi |
| author_facet | Xinli Yang Xing Huang Shibei Tan Tao Chen Xu Qin Helong Chen Jingen Xi Kexian Yi |
| author_sort | Xinli Yang |
| collection | DOAJ |
| description | Agave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with a large single copy region (LSC, 85,894 bp), a pair of inverted repeat regions (IR, 26,573 bp) and a small single copy region (SSC, 18,228 bp). Besides, 86 protein-coding genes, 38 tRNAs and 8 rRNAs are annotated on the chloroplast genome. Phylogenetic result reveals that A. sisalana is closely related with A. americana and A. H11648. |
| first_indexed | 2024-03-11T13:08:48Z |
| format | Article |
| id | doaj.art-9f147c6661974d57b2693a122295bd09 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:08:48Z |
| publishDate | 2021-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9f147c6661974d57b2693a122295bd092023-11-03T14:16:11ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-07-01671855185610.1080/23802359.2021.19353451935345The complete chloroplast genome of Agave sisalanaXinli Yang0Xing Huang1Shibei Tan2Tao Chen3Xu Qin4Helong Chen5Jingen Xi6Kexian Yi7College of Tropical Crops, Hainan UniversityEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesGuangxi Subtropical Crops Research InstituteGuangxi Subtropical Crops Research InstituteEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesEnvironment and Plant Protection Institute, Chinese Academy of Tropical Agricultural SciencesAgave sisalana is one of the Agave cultivars for sisal fiber production around the tropical areas of the world. In the present study, we successfully sequenced and assembled its chloroplast genome. The full size of the genome is 157,268 bp with a GC content at 37.85%. The genome is constructed with a large single copy region (LSC, 85,894 bp), a pair of inverted repeat regions (IR, 26,573 bp) and a small single copy region (SSC, 18,228 bp). Besides, 86 protein-coding genes, 38 tRNAs and 8 rRNAs are annotated on the chloroplast genome. Phylogenetic result reveals that A. sisalana is closely related with A. americana and A. H11648.http://dx.doi.org/10.1080/23802359.2021.1935345agave sisalanachloroplast genomephylogenetic tree |
| spellingShingle | Xinli Yang Xing Huang Shibei Tan Tao Chen Xu Qin Helong Chen Jingen Xi Kexian Yi The complete chloroplast genome of Agave sisalana Mitochondrial DNA. Part B. Resources agave sisalana chloroplast genome phylogenetic tree |
| title | The complete chloroplast genome of Agave sisalana |
| title_full | The complete chloroplast genome of Agave sisalana |
| title_fullStr | The complete chloroplast genome of Agave sisalana |
| title_full_unstemmed | The complete chloroplast genome of Agave sisalana |
| title_short | The complete chloroplast genome of Agave sisalana |
| title_sort | complete chloroplast genome of agave sisalana |
| topic | agave sisalana chloroplast genome phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2021.1935345 |
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