The complete chloroplast genome of Streblus indicus
The first complete chloroplast genome sequences of Streblus indicus were reported in this study. The cpDNA of S. indicus is 159,853 bp in length, contains a large single copy region (LSC) of 88,950 bp and a small single copy region (SSC) of 19,313 bp, which were separated by a pair of inverted repea...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1660246 |
| _version_ | 1797639734626877440 |
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| author | Dejun Yang Qiong Qiu Linhong Xu Yumei Xu Yi Wang |
| author_facet | Dejun Yang Qiong Qiu Linhong Xu Yumei Xu Yi Wang |
| author_sort | Dejun Yang |
| collection | DOAJ |
| description | The first complete chloroplast genome sequences of Streblus indicus were reported in this study. The cpDNA of S. indicus is 159,853 bp in length, contains a large single copy region (LSC) of 88,950 bp and a small single copy region (SSC) of 19,313 bp, which were separated by a pair of inverted repeat (IR) regions of 25,795 bp. The genome contains 129 genes, including 84 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.1%. Phylogenetic analysis of 14 chloroplast genomes within the family Moraceae shows that S. indicus clustered in a unique clade. |
| first_indexed | 2024-03-11T13:20:47Z |
| format | Article |
| id | doaj.art-9fe4d0cef64b46b3ac04dd670186ff89 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:20:47Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-9fe4d0cef64b46b3ac04dd670186ff892023-11-03T10:28:37ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01422815281610.1080/23802359.2019.16602461660246The complete chloroplast genome of Streblus indicusDejun Yang0Qiong Qiu1Linhong Xu2Yumei Xu3Yi Wang4Institute of Tropical Forestry, Yunnan Academy of ForestryInstitute of Tropical Forestry, Yunnan Academy of ForestryInstitute of Tropical Forestry, Yunnan Academy of ForestryInstitute of Tropical Forestry, Yunnan Academy of ForestryInstitute of Tropical Forestry, Yunnan Academy of ForestryThe first complete chloroplast genome sequences of Streblus indicus were reported in this study. The cpDNA of S. indicus is 159,853 bp in length, contains a large single copy region (LSC) of 88,950 bp and a small single copy region (SSC) of 19,313 bp, which were separated by a pair of inverted repeat (IR) regions of 25,795 bp. The genome contains 129 genes, including 84 protein-coding genes, eight ribosomal RNA genes, and 37 transfer RNA genes. The overall GC content of the whole genome is 36.1%. Phylogenetic analysis of 14 chloroplast genomes within the family Moraceae shows that S. indicus clustered in a unique clade.http://dx.doi.org/10.1080/23802359.2019.1660246streblus indicuschloroplastillumina sequencingphylogenetic analysis |
| spellingShingle | Dejun Yang Qiong Qiu Linhong Xu Yumei Xu Yi Wang The complete chloroplast genome of Streblus indicus Mitochondrial DNA. Part B. Resources streblus indicus chloroplast illumina sequencing phylogenetic analysis |
| title | The complete chloroplast genome of Streblus indicus |
| title_full | The complete chloroplast genome of Streblus indicus |
| title_fullStr | The complete chloroplast genome of Streblus indicus |
| title_full_unstemmed | The complete chloroplast genome of Streblus indicus |
| title_short | The complete chloroplast genome of Streblus indicus |
| title_sort | complete chloroplast genome of streblus indicus |
| topic | streblus indicus chloroplast illumina sequencing phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1660246 |
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