Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies

Bibliographic Details
Main Authors: Filip Fratev, Thomas Steinbrecher, Svava Ósk Jónsdóttir
Format: Article
Language:English
Published: American Chemical Society 2018-04-01
Series:ACS Omega
Online Access:http://dx.doi.org/10.1021/acsomega.8b00123
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author Filip Fratev
Thomas Steinbrecher
Svava Ósk Jónsdóttir
author_facet Filip Fratev
Thomas Steinbrecher
Svava Ósk Jónsdóttir
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spelling doaj.art-9fefbd034358404ca04913f3bde55fa02022-12-22T01:29:09ZengAmerican Chemical SocietyACS Omega2470-13432018-04-01344357437110.1021/acsomega.8b00123Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity StudiesFilip Fratev0Thomas Steinbrecher1Svava Ósk Jónsdóttir2Department of Pharmaceutical Sciences, School of Pharmacy, The University of Texas at El Paso, El Paso, Texas, United StatesSchrödinger GmbH, Mannheim, Baden-Württemberg, GermanyinsilTox ApS, Kongens Lyngby, Denmarkhttp://dx.doi.org/10.1021/acsomega.8b00123
spellingShingle Filip Fratev
Thomas Steinbrecher
Svava Ósk Jónsdóttir
Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
ACS Omega
title Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
title_full Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
title_fullStr Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
title_full_unstemmed Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
title_short Prediction of Accurate Binding Modes Using Combination of Classical and Accelerated Molecular Dynamics and Free-Energy Perturbation Calculations: An Application to Toxicity Studies
title_sort prediction of accurate binding modes using combination of classical and accelerated molecular dynamics and free energy perturbation calculations an application to toxicity studies
url http://dx.doi.org/10.1021/acsomega.8b00123
work_keys_str_mv AT filipfratev predictionofaccuratebindingmodesusingcombinationofclassicalandacceleratedmoleculardynamicsandfreeenergyperturbationcalculationsanapplicationtotoxicitystudies
AT thomassteinbrecher predictionofaccuratebindingmodesusingcombinationofclassicalandacceleratedmoleculardynamicsandfreeenergyperturbationcalculationsanapplicationtotoxicitystudies
AT svavaoskjonsdottir predictionofaccuratebindingmodesusingcombinationofclassicalandacceleratedmoleculardynamicsandfreeenergyperturbationcalculationsanapplicationtotoxicitystudies