Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology
Abstract Background Transposables elements (TEs) contribute to both structural and functional dynamics of most eukaryotic genomes. Because of their propensity to densely populate plant and animal genomes, the precise estimation of the impact of transposition on genomic diversity has been considered...
Main Authors: | Emilie Debladis, Christel Llauro, Marie-Christine Carpentier, Marie Mirouze, Olivier Panaud |
---|---|
Format: | Article |
Language: | English |
Published: |
BMC
2017-07-01
|
Series: | BMC Genomics |
Subjects: | |
Online Access: | http://link.springer.com/article/10.1186/s12864-017-3753-z |
Similar Items
-
Combined use of Oxford Nanopore and Illumina sequencing yields insights into soybean structural variation biology
by: Marc-André Lemay, et al.
Published: (2022-02-01) -
Performance of neural network basecalling tools for Oxford Nanopore sequencing
by: Ryan R. Wick, et al.
Published: (2019-06-01) -
The predominantly selfing plant <it>Arabidopsis thaliana </it>experienced a recent reduction in transposable element abundance compared to its outcrossing relative <it>Arabidopsis lyrata</it>
by: de la Chaux Nicole, et al.
Published: (2012-02-01) -
Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection
by: Aurélie Canaguier, et al.
Published: (2022-04-01) -
Updates and Comparative Analysis of the Mitochondrial Genomes of Paracoccidioides spp. Using Oxford Nanopore MinION Sequencing
by: Elizabeth Misas, et al.
Published: (2020-08-01)