AlignHUSH: Alignment of HMMs using structure and hydrophobicity information

<p>Abstract</p> <p>Background</p> <p>Sensitive remote homology detection and accurate alignments especially in the midnight zone of sequence similarity are needed for better function annotation and structural modeling of proteins. An algorithm, AlignHUSH for HMM-HMM ali...

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Bibliographic Details
Main Authors: Krishnadev Oruganty, Srinivasan Narayanaswamy
Format: Article
Language:English
Published: BMC 2011-07-01
Series:BMC Bioinformatics
Online Access:http://www.biomedcentral.com/1471-2105/12/275

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