Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica)
In this study, 182 male animals from 12 native sheep breeds, as well as Karacabey Merino and Karagül breeds of Anatolia, wild sheep Anatolian Mouflon (Ovis gmelinii anatolica) were used as the study material. Based on SRY and SRYM18 regions on the Y-chromosome, haplotypes of the populations were ana...
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| Format: | Article |
| Language: | English |
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Kafkas University, Faculty of Veterinary Medicine
2018-08-01
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| Series: | Kafkas Universitesi Veteriner Fakültesi Dergisi |
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| Online Access: | https://vetdergikafkas.org/pdf.php?id=2406 |
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| author | Arif PARMAKSIZ Ahmet OYMAK Eren YÜNCÜ Sevgin DEMİRCİ Evren KOBAN BAŞTANLAR Emel ÖZKAN ÜNAL İnci TOGAN Füsun ÖZER |
| author_facet | Arif PARMAKSIZ Ahmet OYMAK Eren YÜNCÜ Sevgin DEMİRCİ Evren KOBAN BAŞTANLAR Emel ÖZKAN ÜNAL İnci TOGAN Füsun ÖZER |
| author_sort | Arif PARMAKSIZ |
| collection | DOAJ |
| description | In this study, 182 male animals from 12 native sheep breeds, as well as Karacabey Merino and Karagül breeds of Anatolia, wild sheep Anatolian Mouflon (Ovis gmelinii anatolica) were used as the study material. Based on SRY and SRYM18 regions on the Y-chromosome, haplotypes of the
populations were analyzed using DNA sequence analyses. The SRY region, A-oY1 allele was observed in all of the individuals studied. On the other hand, four different alleles corresponding to four Y-chromosome haplotypes were detected at the SRYM18 microsatellite region. Among native Anatolian breeds (n=143), H6 haplotype (80.41%), H4 haplotype (9.09%), H8 haplotype (8.40%) and H12 haplotype (2.1%) were identified. H6 haplotype was observed in all 16 individuals of Ovis gmelinii anatolica. Pairwise FST values based on haplotype frequencies were calculated for domestic sheep, and the highest FST value was observed between Karagül and Kıvırcık along with Karagül and Ovis gmelinii anatolica with pairwise FST value of 0.43202 (P<0.01). Y chromosome polymorphism of sheep from Turkey were examined comparatively with the accumulated data in the literature. Out of seven haplotypes (H4, H5, H6, H7, H8, H12, H19) observed in Europe and Asia, 4 haplotypes (H4, H6, H8 and H12) were observed in Anatolia. H12 was a private haplotype of Sakız, H6 seems to be the predominant haplotype of domestic sheep (79.51%) as well as being the only haplotype observed in Ovis gmelini anatolica. H4 haplotype seemed to be associated with fat tailed sheep migrating to Turkey, entering from south east of Turkey, which may be related with the arrival of nomadic Turks. |
| first_indexed | 2024-03-13T04:38:33Z |
| format | Article |
| id | doaj.art-a2850b428b344d2e92f3e139f10d1670 |
| institution | Directory Open Access Journal |
| issn | 1309-2251 |
| language | English |
| last_indexed | 2024-03-13T04:38:33Z |
| publishDate | 2018-08-01 |
| publisher | Kafkas University, Faculty of Veterinary Medicine |
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| series | Kafkas Universitesi Veteriner Fakültesi Dergisi |
| spelling | doaj.art-a2850b428b344d2e92f3e139f10d16702023-06-19T06:41:19ZengKafkas University, Faculty of Veterinary MedicineKafkas Universitesi Veteriner Fakültesi Dergisi1309-22512018-08-0124682182810.9775/kvfd.2018.199622406Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica)Arif PARMAKSIZ0Ahmet OYMAK1Eren YÜNCÜ2Sevgin DEMİRCİ3Evren KOBAN BAŞTANLAR4Emel ÖZKAN ÜNAL5İnci TOGAN6Füsun ÖZER7The Department of Biology, Faculty of Science-Literature, Harran University, TR-63290 Şanlıurfa - TURKEYThe Department of Biology, Faculty of Science-Literature, Harran University, TR-63290 Şanlıurfa - TURKEYThe Department of Biological Sciences, Middle East Technical University, TR-06800 Ankara - TURKEYThe Department of Biological Sciences, Middle East Technical University, TR-06800 Ankara - TURKEYThe Department of Biology, Faculty of Science, Ege University, TR-35100 İzmir - TURKEYThe Department of Animal Science, Faculty of Agriculture, Namık Kemal University, TR-59030 Tekirdağ - TURKEYThe Department of Biological Sciences, Middle East Technical University, TR-06800 Ankara - TURKEYThe Department of Biological Sciences, Middle East Technical University, TR-06800 Ankara - TURKEYIn this study, 182 male animals from 12 native sheep breeds, as well as Karacabey Merino and Karagül breeds of Anatolia, wild sheep Anatolian Mouflon (Ovis gmelinii anatolica) were used as the study material. Based on SRY and SRYM18 regions on the Y-chromosome, haplotypes of the populations were analyzed using DNA sequence analyses. The SRY region, A-oY1 allele was observed in all of the individuals studied. On the other hand, four different alleles corresponding to four Y-chromosome haplotypes were detected at the SRYM18 microsatellite region. Among native Anatolian breeds (n=143), H6 haplotype (80.41%), H4 haplotype (9.09%), H8 haplotype (8.40%) and H12 haplotype (2.1%) were identified. H6 haplotype was observed in all 16 individuals of Ovis gmelinii anatolica. Pairwise FST values based on haplotype frequencies were calculated for domestic sheep, and the highest FST value was observed between Karagül and Kıvırcık along with Karagül and Ovis gmelinii anatolica with pairwise FST value of 0.43202 (P<0.01). Y chromosome polymorphism of sheep from Turkey were examined comparatively with the accumulated data in the literature. Out of seven haplotypes (H4, H5, H6, H7, H8, H12, H19) observed in Europe and Asia, 4 haplotypes (H4, H6, H8 and H12) were observed in Anatolia. H12 was a private haplotype of Sakız, H6 seems to be the predominant haplotype of domestic sheep (79.51%) as well as being the only haplotype observed in Ovis gmelini anatolica. H4 haplotype seemed to be associated with fat tailed sheep migrating to Turkey, entering from south east of Turkey, which may be related with the arrival of nomadic Turks.https://vetdergikafkas.org/pdf.php?id=2406y-chromosome haplotypessrysrym18ovis gmelinii anatolicanative sheep breeds of turkey |
| spellingShingle | Arif PARMAKSIZ Ahmet OYMAK Eren YÜNCÜ Sevgin DEMİRCİ Evren KOBAN BAŞTANLAR Emel ÖZKAN ÜNAL İnci TOGAN Füsun ÖZER Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) Kafkas Universitesi Veteriner Fakültesi Dergisi y-chromosome haplotypes sry srym18 ovis gmelinii anatolica native sheep breeds of turkey |
| title | Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) |
| title_full | Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) |
| title_fullStr | Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) |
| title_full_unstemmed | Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) |
| title_short | Y-chromosome polymorphisms in 12 native, karagül, karacabey merino breeds from turkey and anatolian mouflon (ovis gmelinii anatolica) |
| title_sort | y chromosome polymorphisms in 12 native karagul karacabey merino breeds from turkey and anatolian mouflon ovis gmelinii anatolica |
| topic | y-chromosome haplotypes sry srym18 ovis gmelinii anatolica native sheep breeds of turkey |
| url | https://vetdergikafkas.org/pdf.php?id=2406 |
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