Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties

Abstract Photoconvertible fluorescent proteins (PCFP) are important cellular markers in advanced imaging modalities such as photoactivatable localization microscopy (PALM). However, their complex photophysical and photochemical behavior hampers applications such as quantitative and single‐particle‐t...

Full description

Bibliographic Details
Main Authors: Arijit Maity, Jip Wulffelé, Isabel Ayala, Adrien Favier, Virgile Adam, Dominique Bourgeois, Bernhard Brutscher
Format: Article
Language:English
Published: Wiley 2024-03-01
Series:Advanced Science
Subjects:
Online Access:https://doi.org/10.1002/advs.202306272
_version_ 1797263479256645632
author Arijit Maity
Jip Wulffelé
Isabel Ayala
Adrien Favier
Virgile Adam
Dominique Bourgeois
Bernhard Brutscher
author_facet Arijit Maity
Jip Wulffelé
Isabel Ayala
Adrien Favier
Virgile Adam
Dominique Bourgeois
Bernhard Brutscher
author_sort Arijit Maity
collection DOAJ
description Abstract Photoconvertible fluorescent proteins (PCFP) are important cellular markers in advanced imaging modalities such as photoactivatable localization microscopy (PALM). However, their complex photophysical and photochemical behavior hampers applications such as quantitative and single‐particle‐tracking PALM. This work employs multidimensional NMR combined with ensemble fluorescence measurements to show that the popular mEos4b in its Green state populates two conformations (A and B), differing in side‐chain protonation of the conserved residues E212 and H62,  altering the hydrogen‐bond network in the chromophore pocket. The interconversion (protonation/deprotonation) between these two states, which occurs on the minutes time scale in the dark, becomes strongly accelerated in the presence of UV light, leading to a population shift. This work shows that the reversible photoswitching and Green‐to‐Red photoconversion properties differ between the A and B states. The chromophore in the A‐state photoswitches more efficiently and is proposed to be more prone to photoconversion, while the B‐state shows a higher level of photobleaching. Altogether, this data highlights the central role of conformational heterogeneity in fluorescent protein photochemistry.
first_indexed 2024-04-25T00:13:39Z
format Article
id doaj.art-a2ba798876974fd1b3d51ee2afb49cd0
institution Directory Open Access Journal
issn 2198-3844
language English
last_indexed 2024-04-25T00:13:39Z
publishDate 2024-03-01
publisher Wiley
record_format Article
series Advanced Science
spelling doaj.art-a2ba798876974fd1b3d51ee2afb49cd02024-03-13T07:30:35ZengWileyAdvanced Science2198-38442024-03-011110n/an/a10.1002/advs.202306272Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical PropertiesArijit Maity0Jip Wulffelé1Isabel Ayala2Adrien Favier3Virgile Adam4Dominique Bourgeois5Bernhard Brutscher6CEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceCEA CNRS Institut de Biologie Structurale (IBS) Université Grenoble Alpes 71 avenue des Martyrs, Cedex 9 Grenoble 38044 FranceAbstract Photoconvertible fluorescent proteins (PCFP) are important cellular markers in advanced imaging modalities such as photoactivatable localization microscopy (PALM). However, their complex photophysical and photochemical behavior hampers applications such as quantitative and single‐particle‐tracking PALM. This work employs multidimensional NMR combined with ensemble fluorescence measurements to show that the popular mEos4b in its Green state populates two conformations (A and B), differing in side‐chain protonation of the conserved residues E212 and H62,  altering the hydrogen‐bond network in the chromophore pocket. The interconversion (protonation/deprotonation) between these two states, which occurs on the minutes time scale in the dark, becomes strongly accelerated in the presence of UV light, leading to a population shift. This work shows that the reversible photoswitching and Green‐to‐Red photoconversion properties differ between the A and B states. The chromophore in the A‐state photoswitches more efficiently and is proposed to be more prone to photoconversion, while the B‐state shows a higher level of photobleaching. Altogether, this data highlights the central role of conformational heterogeneity in fluorescent protein photochemistry.https://doi.org/10.1002/advs.202306272fluorescencePCFPproteinsolution NMRsuper‐resolution microscopy
spellingShingle Arijit Maity
Jip Wulffelé
Isabel Ayala
Adrien Favier
Virgile Adam
Dominique Bourgeois
Bernhard Brutscher
Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
Advanced Science
fluorescence
PCFP
protein
solution NMR
super‐resolution microscopy
title Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
title_full Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
title_fullStr Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
title_full_unstemmed Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
title_short Structural Heterogeneity in a Phototransformable Fluorescent Protein Impacts its Photochemical Properties
title_sort structural heterogeneity in a phototransformable fluorescent protein impacts its photochemical properties
topic fluorescence
PCFP
protein
solution NMR
super‐resolution microscopy
url https://doi.org/10.1002/advs.202306272
work_keys_str_mv AT arijitmaity structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT jipwulffele structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT isabelayala structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT adrienfavier structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT virgileadam structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT dominiquebourgeois structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties
AT bernhardbrutscher structuralheterogeneityinaphototransformablefluorescentproteinimpactsitsphotochemicalproperties