Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool
Rapid sequencing of RNA/DNA from pathogen samples obtained during disease outbreaks provides critical scientific and public health information. However, challenges exist for exporting samples to laboratories or establishing conventional sequencers in remote outbreak regions. We successfully used a n...
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| Format: | Article |
| Language: | English |
| Published: |
Centers for Disease Control and Prevention
2016-02-01
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| Series: | Emerging Infectious Diseases |
| Subjects: | |
| Online Access: | https://wwwnc.cdc.gov/eid/article/22/2/15-1796_article |
| _version_ | 1818509558004318208 |
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| author | Thomas Hoenen Allison Groseth Kyle Rosenke Robert J. Fischer Andreas Hoenen Seth D. Judson Cynthia Martellaro Darryl Falzarano Andrea Marzi R. Burke Squires Kurt R. Wollenberg Emmie de Wit Joseph B. Prescott David Safronetz Neeltje van Doremalen Trenton Bushmaker Friederike Feldmann Kristin McNally Fatorma K. Bolay Barry Fields Tara Sealy Mark Rayfield Stuart T. Nichol Kathryn C. Zoon Moses Massaquoi Vincent J. Munster Heinz Feldmann |
| author_facet | Thomas Hoenen Allison Groseth Kyle Rosenke Robert J. Fischer Andreas Hoenen Seth D. Judson Cynthia Martellaro Darryl Falzarano Andrea Marzi R. Burke Squires Kurt R. Wollenberg Emmie de Wit Joseph B. Prescott David Safronetz Neeltje van Doremalen Trenton Bushmaker Friederike Feldmann Kristin McNally Fatorma K. Bolay Barry Fields Tara Sealy Mark Rayfield Stuart T. Nichol Kathryn C. Zoon Moses Massaquoi Vincent J. Munster Heinz Feldmann |
| author_sort | Thomas Hoenen |
| collection | DOAJ |
| description | Rapid sequencing of RNA/DNA from pathogen samples obtained during disease outbreaks provides critical scientific and public health information. However, challenges exist for exporting samples to laboratories or establishing conventional sequencers in remote outbreak regions. We successfully used a novel, pocket-sized nanopore sequencer at a field diagnostic laboratory in Liberia during the current Ebola virus outbreak. |
| first_indexed | 2024-12-10T22:47:03Z |
| format | Article |
| id | doaj.art-a2cc6cfca81b43ebb719175487d2018c |
| institution | Directory Open Access Journal |
| issn | 1080-6040 1080-6059 |
| language | English |
| last_indexed | 2024-12-10T22:47:03Z |
| publishDate | 2016-02-01 |
| publisher | Centers for Disease Control and Prevention |
| record_format | Article |
| series | Emerging Infectious Diseases |
| spelling | doaj.art-a2cc6cfca81b43ebb719175487d2018c2022-12-22T01:30:32ZengCenters for Disease Control and PreventionEmerging Infectious Diseases1080-60401080-60592016-02-0122233133410.3201/eid2202.151796Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak ToolThomas HoenenAllison GrosethKyle RosenkeRobert J. FischerAndreas HoenenSeth D. JudsonCynthia MartellaroDarryl FalzaranoAndrea MarziR. Burke SquiresKurt R. WollenbergEmmie de WitJoseph B. PrescottDavid SafronetzNeeltje van DoremalenTrenton BushmakerFriederike FeldmannKristin McNallyFatorma K. BolayBarry FieldsTara SealyMark RayfieldStuart T. NicholKathryn C. ZoonMoses MassaquoiVincent J. MunsterHeinz FeldmannRapid sequencing of RNA/DNA from pathogen samples obtained during disease outbreaks provides critical scientific and public health information. However, challenges exist for exporting samples to laboratories or establishing conventional sequencers in remote outbreak regions. We successfully used a novel, pocket-sized nanopore sequencer at a field diagnostic laboratory in Liberia during the current Ebola virus outbreak.https://wwwnc.cdc.gov/eid/article/22/2/15-1796_articleEbola hemorrhagic feverEbola virusEbolavirusviruseshigh-throughput nucleotide sequencingnanopore sequencing |
| spellingShingle | Thomas Hoenen Allison Groseth Kyle Rosenke Robert J. Fischer Andreas Hoenen Seth D. Judson Cynthia Martellaro Darryl Falzarano Andrea Marzi R. Burke Squires Kurt R. Wollenberg Emmie de Wit Joseph B. Prescott David Safronetz Neeltje van Doremalen Trenton Bushmaker Friederike Feldmann Kristin McNally Fatorma K. Bolay Barry Fields Tara Sealy Mark Rayfield Stuart T. Nichol Kathryn C. Zoon Moses Massaquoi Vincent J. Munster Heinz Feldmann Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool Emerging Infectious Diseases Ebola hemorrhagic fever Ebola virus Ebolavirus viruses high-throughput nucleotide sequencing nanopore sequencing |
| title | Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool |
| title_full | Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool |
| title_fullStr | Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool |
| title_full_unstemmed | Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool |
| title_short | Nanopore Sequencing as a Rapidly Deployable Ebola Outbreak Tool |
| title_sort | nanopore sequencing as a rapidly deployable ebola outbreak tool |
| topic | Ebola hemorrhagic fever Ebola virus Ebolavirus viruses high-throughput nucleotide sequencing nanopore sequencing |
| url | https://wwwnc.cdc.gov/eid/article/22/2/15-1796_article |
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