Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae)
Holotrichia parallela (Motschulsky, 1854) is an important pest for peanut, potato, and soybean in China, and it causes great economic losses. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of H. parallela. This mitogenome was 16,975 bp long and encoded 13 pro...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.2016082 |
| _version_ | 1797638653290217472 |
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| author | Jing Zhao Feng Zhang Jingjing Yuan Zhenjie Du Xuebin Qi |
| author_facet | Jing Zhao Feng Zhang Jingjing Yuan Zhenjie Du Xuebin Qi |
| author_sort | Jing Zhao |
| collection | DOAJ |
| description | Holotrichia parallela (Motschulsky, 1854) is an important pest for peanut, potato, and soybean in China, and it causes great economic losses. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of H. parallela. This mitogenome was 16,975 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal RNA genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Scarabaeidae. Most PCGs of H. parallela have the conventional start codons ATN, with the exception of cox1 (AAC). Except for three genes (cox1, cox2, and cox3) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. Phylogenetic analysis positioned H. parallela in a well-supported clade with Rhopaea magnicornis, Polyphylla gracilicornis, and Melolontha hippocastani. The relationships (Dynastinae+(Cetoniinae+(Melolonthinae+(Rutelinae + Scarabaeinae)))) were supported in Scarabaeidae. |
| first_indexed | 2024-03-11T13:06:44Z |
| format | Article |
| id | doaj.art-a4162ac808b840919e94689659a934f0 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:06:44Z |
| publishDate | 2022-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-a4162ac808b840919e94689659a934f02023-11-03T14:36:01ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-01-017120821010.1080/23802359.2021.20160822016082Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae)Jing Zhao0Feng Zhang1Jingjing Yuan2Zhenjie Du3Xuebin Qi4College of Materials Science and Engineering, Henan Institute of TechnologyCollege of Intelligent Engineering, Henan Institute of TechnologyHenan Institute of Metrology, China Henan Institute of MetrologyFarmland Irrigation Research Institute, Chinese Academy of Agricultural SciencesFarmland Irrigation Research Institute, Chinese Academy of Agricultural SciencesHolotrichia parallela (Motschulsky, 1854) is an important pest for peanut, potato, and soybean in China, and it causes great economic losses. In this study, we sequenced and analyzed the complete mitochondrial genome (mitogenome) of H. parallela. This mitogenome was 16,975 bp long and encoded 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNAs), and two ribosomal RNA genes (rRNAs). Gene order was conserved and identical to most other previously sequenced Scarabaeidae. Most PCGs of H. parallela have the conventional start codons ATN, with the exception of cox1 (AAC). Except for three genes (cox1, cox2, and cox3) end with the incomplete stop codon T−, all other PCGs terminated with the stop codon TAA or TAG. Phylogenetic analysis positioned H. parallela in a well-supported clade with Rhopaea magnicornis, Polyphylla gracilicornis, and Melolontha hippocastani. The relationships (Dynastinae+(Cetoniinae+(Melolonthinae+(Rutelinae + Scarabaeinae)))) were supported in Scarabaeidae.http://dx.doi.org/10.1080/23802359.2021.2016082scarabaeidaeholotrichia parallelamitochondrial genomephylogenetic analysis |
| spellingShingle | Jing Zhao Feng Zhang Jingjing Yuan Zhenjie Du Xuebin Qi Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) Mitochondrial DNA. Part B. Resources scarabaeidae holotrichia parallela mitochondrial genome phylogenetic analysis |
| title | Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) |
| title_full | Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) |
| title_fullStr | Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) |
| title_full_unstemmed | Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) |
| title_short | Characterization and phylogenetic analysis of the mitochondrial genome of Holotrichia parallela (Coleoptera: Scarabaeidae: Melolonthinae) |
| title_sort | characterization and phylogenetic analysis of the mitochondrial genome of holotrichia parallela coleoptera scarabaeidae melolonthinae |
| topic | scarabaeidae holotrichia parallela mitochondrial genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.2016082 |
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