A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo

Human noroviruses (HuNoVs) are the most common cause of viral gastroenteritis resulting annually in ~219,000 deaths and a societal cost of ~USD 60 billion, and no antivirals or vaccines are available. Here, we assess the anti-norovirus activity of new peptidomimetic aldehydes related to the protease...

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Main Authors: Jana Van Dycke, Wenhao Dai, Zoe Stylianidou, Jian Li, Arno Cuvry, Emma Roux, Bingqian Li, Jasper Rymenants, Lindsey Bervoets, Peter de Witte, Hong Liu, Johan Neyts, Joana Rocha-Pereira
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Language:English
Published: MDPI AG 2021-09-01
Series:Viruses
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Online Access:https://www.mdpi.com/1999-4915/13/9/1852
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author Jana Van Dycke
Wenhao Dai
Zoe Stylianidou
Jian Li
Arno Cuvry
Emma Roux
Bingqian Li
Jasper Rymenants
Lindsey Bervoets
Peter de Witte
Hong Liu
Johan Neyts
Joana Rocha-Pereira
author_facet Jana Van Dycke
Wenhao Dai
Zoe Stylianidou
Jian Li
Arno Cuvry
Emma Roux
Bingqian Li
Jasper Rymenants
Lindsey Bervoets
Peter de Witte
Hong Liu
Johan Neyts
Joana Rocha-Pereira
author_sort Jana Van Dycke
collection DOAJ
description Human noroviruses (HuNoVs) are the most common cause of viral gastroenteritis resulting annually in ~219,000 deaths and a societal cost of ~USD 60 billion, and no antivirals or vaccines are available. Here, we assess the anti-norovirus activity of new peptidomimetic aldehydes related to the protease inhibitor rupintrivir. The early hit compound <b>4</b> inhibited the replication of murine norovirus (MNV) and the HuNoV GI.1 replicon in vitro (EC<sub>50</sub> ~1 µM) and swiftly cleared the HuNoV GI.1 replicon from the cells. Compound <b>4</b> still inhibits the proteolytic activity. We selected a resistant GI.1 replicon, with a mutation (I109V) in a highly conserved region of the viral protease, conferring a low yield of resistance against compound <b>4</b> and rupintrivir. After testing new derivatives, compound <b>10d</b> was the most potent (EC<sub>50</sub> nanomolar range). Molecular docking indicated that the aldehyde group of compounds <b>4</b> and <b>10d</b> bind with Cys139 in the HuNoV 3CL protease by a covalent linkage. Finally, compound <b>10d</b> inhibited the replication of HuNoV GII.4 in infected zebrafish larvae, and PK studies in mice showed an adequate profile.
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spelling doaj.art-a4ae9d5cb59a4e8db1379b4b9612adf82023-11-22T15:38:56ZengMDPI AGViruses1999-49152021-09-01139185210.3390/v13091852A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In VivoJana Van Dycke0Wenhao Dai1Zoe Stylianidou2Jian Li3Arno Cuvry4Emma Roux5Bingqian Li6Jasper Rymenants7Lindsey Bervoets8Peter de Witte9Hong Liu10Johan Neyts11Joana Rocha-Pereira12Laboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, ChinaLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, ChinaLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, ChinaLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumLaboratory for Molecular Biodiscovery, KU Leuven–Department of Pharmaceutical and Pharmacological Sciences, 3000 Leuven, BelgiumState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, ChinaLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumLaboratory of Virology and Chemotherapy, KU Leuven–Department of Microbiology, Immunology and Transplantation, Rega Institute, 3000 Leuven, BelgiumHuman noroviruses (HuNoVs) are the most common cause of viral gastroenteritis resulting annually in ~219,000 deaths and a societal cost of ~USD 60 billion, and no antivirals or vaccines are available. Here, we assess the anti-norovirus activity of new peptidomimetic aldehydes related to the protease inhibitor rupintrivir. The early hit compound <b>4</b> inhibited the replication of murine norovirus (MNV) and the HuNoV GI.1 replicon in vitro (EC<sub>50</sub> ~1 µM) and swiftly cleared the HuNoV GI.1 replicon from the cells. Compound <b>4</b> still inhibits the proteolytic activity. We selected a resistant GI.1 replicon, with a mutation (I109V) in a highly conserved region of the viral protease, conferring a low yield of resistance against compound <b>4</b> and rupintrivir. After testing new derivatives, compound <b>10d</b> was the most potent (EC<sub>50</sub> nanomolar range). Molecular docking indicated that the aldehyde group of compounds <b>4</b> and <b>10d</b> bind with Cys139 in the HuNoV 3CL protease by a covalent linkage. Finally, compound <b>10d</b> inhibited the replication of HuNoV GII.4 in infected zebrafish larvae, and PK studies in mice showed an adequate profile.https://www.mdpi.com/1999-4915/13/9/1852Caliciviridaeantiviralssmall moleculedanio rerioinfection
spellingShingle Jana Van Dycke
Wenhao Dai
Zoe Stylianidou
Jian Li
Arno Cuvry
Emma Roux
Bingqian Li
Jasper Rymenants
Lindsey Bervoets
Peter de Witte
Hong Liu
Johan Neyts
Joana Rocha-Pereira
A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
Viruses
Caliciviridae
antivirals
small molecule
danio rerio
infection
title A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
title_full A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
title_fullStr A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
title_full_unstemmed A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
title_short A Novel Class of Norovirus Inhibitors Targeting the Viral Protease with Potent Antiviral Activity In Vitro and In Vivo
title_sort novel class of norovirus inhibitors targeting the viral protease with potent antiviral activity in vitro and in vivo
topic Caliciviridae
antivirals
small molecule
danio rerio
infection
url https://www.mdpi.com/1999-4915/13/9/1852
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