The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability

In plants, cytosine DNA methylation is an efficient defense mechanism against geminiviruses, since methylation of the viral genome results in transcriptional gene silencing (TGS). As a counter-defense mechanism, geminiviruses encode viral proteins to suppress viral DNA methylation and TGS. However,...

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Main Authors: Yuzhen Mei, Yaqin Wang, Fangfang Li, Xueping Zhou, Savithramma P. Dinesh-Kumar
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-10-01
Series:PLoS Pathogens
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7529289/?tool=EBI
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author Yuzhen Mei
Yaqin Wang
Fangfang Li
Xueping Zhou
Savithramma P. Dinesh-Kumar
author_facet Yuzhen Mei
Yaqin Wang
Fangfang Li
Xueping Zhou
Savithramma P. Dinesh-Kumar
author_sort Yuzhen Mei
collection DOAJ
description In plants, cytosine DNA methylation is an efficient defense mechanism against geminiviruses, since methylation of the viral genome results in transcriptional gene silencing (TGS). As a counter-defense mechanism, geminiviruses encode viral proteins to suppress viral DNA methylation and TGS. However, the molecular mechanisms by which viral proteins contribute to TGS suppression remain incompletely understood. In this study, we found that the C4 protein encoded by tomato leaf curl Yunnan virus (TLCYnV) suppresses methylation of the viral genome through interacting with and impairing the DNA-binding ability of NbDRM2, a pivotal DNA methyltransferase in the methyl cycle. We show that NbDRM2 catalyzes the addition of methyl groups on specific cytosine sites of the viral genome, hence playing an important role in anti-viral defense. Underscoring the relevance of the C4-mediated suppression of NbDRM2 activity, plants infected by TLCYnV producing C4(S43A), a point mutant version of C4 unable to interact with NbDRM2, display milder symptoms and lower virus accumulation, concomitant with enhanced viral DNA methylation, than plants infected by wild-type TLCYnV. Expression of TLCYnV C4, but not of the NbDRM2-interaction compromised C4(S43A) mutant, in 16c-TGS Nicotiana benthamiana plants results in the recovery of GFP, a proxy for suppression of TGS. This study provides new insights into the molecular mechanisms by which geminiviruses suppress TGS, and uncovers a new viral strategy based on the inactivation of the methyltransferase NbDRM2. Author summary Interfering with transcriptional gene silencing (TGS) is essential for DNA viruses to infect and replicate in plant cells. Some members of the Geminiviridae family encode a C4 protein capable of inhibiting TGS, hence promoting virulence. However, the molecular mechanism underlying the C4-mediated TGS suppression is still incompletely understood. This study demonstrates that the C4 protein encoded by tomato leaf curl Yunnan virus interacts with NbDRM2, a pivotal DNA methyltransferase in the methyl cycle, and interferes with its ability to bind the viral DNA. As a result, methylation of the viral genome is impaired, which in turn favours viral replication and spread. Our results uncover a novel strategy deployed by geminiviruses to counter anti-viral DNA methylation, hence shedding new light onto the arms race between viruses and hosts.
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spelling doaj.art-a4c798d76ec44199a9f3ca66cba089182022-12-22T03:00:17ZengPublic Library of Science (PLoS)PLoS Pathogens1553-73742020-10-011610The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding abilityYuzhen MeiYaqin WangFangfang LiXueping ZhouSavithramma P. Dinesh-KumarIn plants, cytosine DNA methylation is an efficient defense mechanism against geminiviruses, since methylation of the viral genome results in transcriptional gene silencing (TGS). As a counter-defense mechanism, geminiviruses encode viral proteins to suppress viral DNA methylation and TGS. However, the molecular mechanisms by which viral proteins contribute to TGS suppression remain incompletely understood. In this study, we found that the C4 protein encoded by tomato leaf curl Yunnan virus (TLCYnV) suppresses methylation of the viral genome through interacting with and impairing the DNA-binding ability of NbDRM2, a pivotal DNA methyltransferase in the methyl cycle. We show that NbDRM2 catalyzes the addition of methyl groups on specific cytosine sites of the viral genome, hence playing an important role in anti-viral defense. Underscoring the relevance of the C4-mediated suppression of NbDRM2 activity, plants infected by TLCYnV producing C4(S43A), a point mutant version of C4 unable to interact with NbDRM2, display milder symptoms and lower virus accumulation, concomitant with enhanced viral DNA methylation, than plants infected by wild-type TLCYnV. Expression of TLCYnV C4, but not of the NbDRM2-interaction compromised C4(S43A) mutant, in 16c-TGS Nicotiana benthamiana plants results in the recovery of GFP, a proxy for suppression of TGS. This study provides new insights into the molecular mechanisms by which geminiviruses suppress TGS, and uncovers a new viral strategy based on the inactivation of the methyltransferase NbDRM2. Author summary Interfering with transcriptional gene silencing (TGS) is essential for DNA viruses to infect and replicate in plant cells. Some members of the Geminiviridae family encode a C4 protein capable of inhibiting TGS, hence promoting virulence. However, the molecular mechanism underlying the C4-mediated TGS suppression is still incompletely understood. This study demonstrates that the C4 protein encoded by tomato leaf curl Yunnan virus interacts with NbDRM2, a pivotal DNA methyltransferase in the methyl cycle, and interferes with its ability to bind the viral DNA. As a result, methylation of the viral genome is impaired, which in turn favours viral replication and spread. Our results uncover a novel strategy deployed by geminiviruses to counter anti-viral DNA methylation, hence shedding new light onto the arms race between viruses and hosts.https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7529289/?tool=EBI
spellingShingle Yuzhen Mei
Yaqin Wang
Fangfang Li
Xueping Zhou
Savithramma P. Dinesh-Kumar
The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
PLoS Pathogens
title The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
title_full The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
title_fullStr The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
title_full_unstemmed The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
title_short The C4 protein encoded by tomato leaf curl Yunnan virus reverses transcriptional gene silencing by interacting with NbDRM2 and impairing its DNA-binding ability
title_sort c4 protein encoded by tomato leaf curl yunnan virus reverses transcriptional gene silencing by interacting with nbdrm2 and impairing its dna binding ability
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7529289/?tool=EBI
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