In silico analysis and a comparative genomics approach to predict pathogenic trehalase genes in the complete genome of Antarctica Shigella sp. PAMC28760

In silico analysis and a comparative genomics approach to predict pathogenic trehalase genes in the complete genome of Antarctica Shigella sp. PAMC28760

Although four Shigella species (S. flexneri, S. sonnei, S. dysenteriae, and S. boydii) have been reported, S. sp. PAMC 28760, an Antarctica isolate, is the only one with a complete genome deposited in NCBI database as an uncharacterized isolate. Because it is the world’s driest, windiest, and coldes...

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Bibliographic Details
Main Authors: Prasansah Shrestha, Jayram Karmacharya, So-Ra Han, Hyun Park, Tae-Jin Oh
Format: Article
Language:English
Published: Taylor & Francis Group 2022-12-01
Series:Virulence
Subjects:
Shigella sp.
trehalase
MP3
HMM
SVM
prokka
Online Access:https://www.tandfonline.com/doi/10.1080/21505594.2022.2117679

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