Chloroplast genome of Gaura parviflora Douglas and its comparative analysis
Gaura parviflora Douglas (Onagraceae) is an annual or perennial herbaceous plant from the prairie of North America. It has become a harmful exotic invading plant in China due to its strong adaptability, fast growth, massive propagation and reproduction. The complete chloroplast (cp) genome of G. par...
| Những tác giả chính: | , , , , |
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| Định dạng: | Bài viết |
| Ngôn ngữ: | English |
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Taylor & Francis Group
2021-03-01
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| Loạt: | Mitochondrial DNA. Part B. Resources |
| Những chủ đề: | |
| Truy cập trực tuyến: | http://dx.doi.org/10.1080/23802359.2021.1878960 |
| _version_ | 1827772554214899712 |
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| author | Bin Zhang Ruige Wu Meng Liu Xiaoran Cai Yueqin Cheng |
| author_facet | Bin Zhang Ruige Wu Meng Liu Xiaoran Cai Yueqin Cheng |
| author_sort | Bin Zhang |
| collection | DOAJ |
| description | Gaura parviflora Douglas (Onagraceae) is an annual or perennial herbaceous plant from the prairie of North America. It has become a harmful exotic invading plant in China due to its strong adaptability, fast growth, massive propagation and reproduction. The complete chloroplast (cp) genome of G. parviflora was reported in this study. The size of the complete cp genome of G. parviflora is 161,318 bp in length, including a pair of inverted repeat (IR) regions of 27,402 bp, a large single-copy (LSC) region of 89,132 bp, and a small single-copy (SSC) region of 17,382 bp. A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Comparison of cp genomes of four species from Onagraceae indicated that Onagraceae cp genomes had high nucleotide diversity. In addition, a few highly variable regions of these cp genomes were also detected. The phylogenetic tree showed that G. parviflora is closely related to Oenothera. Thus, the chloroplast genome of G. parviflora can provide valuable genetic information for species identification and phylogenetic analysis. |
| first_indexed | 2024-03-11T13:10:51Z |
| format | Article |
| id | doaj.art-a6e262148e6e4dbaa97f2476ad3d1ff7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:10:51Z |
| publishDate | 2021-03-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-a6e262148e6e4dbaa97f2476ad3d1ff72023-11-03T14:08:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-03-016376076110.1080/23802359.2021.18789601878960Chloroplast genome of Gaura parviflora Douglas and its comparative analysisBin Zhang0Ruige Wu1Meng Liu2Xiaoran Cai3Yueqin Cheng4College of plant protection, Henan Agricultural UniversityNanyang Grain and Oil Quality Inspection CenterCollege of plant protection, Henan Agricultural UniversityCollege of plant protection, Henan Agricultural UniversityCollege of plant protection, Henan Agricultural UniversityGaura parviflora Douglas (Onagraceae) is an annual or perennial herbaceous plant from the prairie of North America. It has become a harmful exotic invading plant in China due to its strong adaptability, fast growth, massive propagation and reproduction. The complete chloroplast (cp) genome of G. parviflora was reported in this study. The size of the complete cp genome of G. parviflora is 161,318 bp in length, including a pair of inverted repeat (IR) regions of 27,402 bp, a large single-copy (LSC) region of 89,132 bp, and a small single-copy (SSC) region of 17,382 bp. A total of 130 genes were annotated, including 85 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Comparison of cp genomes of four species from Onagraceae indicated that Onagraceae cp genomes had high nucleotide diversity. In addition, a few highly variable regions of these cp genomes were also detected. The phylogenetic tree showed that G. parviflora is closely related to Oenothera. Thus, the chloroplast genome of G. parviflora can provide valuable genetic information for species identification and phylogenetic analysis.http://dx.doi.org/10.1080/23802359.2021.1878960gaura parviflora douglaschloroplast genomecomparative analysisphylogenetic analysis |
| spellingShingle | Bin Zhang Ruige Wu Meng Liu Xiaoran Cai Yueqin Cheng Chloroplast genome of Gaura parviflora Douglas and its comparative analysis Mitochondrial DNA. Part B. Resources gaura parviflora douglas chloroplast genome comparative analysis phylogenetic analysis |
| title | Chloroplast genome of Gaura parviflora Douglas and its comparative analysis |
| title_full | Chloroplast genome of Gaura parviflora Douglas and its comparative analysis |
| title_fullStr | Chloroplast genome of Gaura parviflora Douglas and its comparative analysis |
| title_full_unstemmed | Chloroplast genome of Gaura parviflora Douglas and its comparative analysis |
| title_short | Chloroplast genome of Gaura parviflora Douglas and its comparative analysis |
| title_sort | chloroplast genome of gaura parviflora douglas and its comparative analysis |
| topic | gaura parviflora douglas chloroplast genome comparative analysis phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1878960 |
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