The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal

Antibiotic resistance is a public health problem. The emergence of carbapenemase-producing Enterobacterales (CPE) infections is a concern, particularly in Senegal. (1) Methods: Between January 2019 and July 2022, 240 isolates of enterobacteria resistant to third-generation cephalosporins and imipene...

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Main Authors: Habibou Sarr, Aissatou Ahmet Niang, Amadou Diop, Oleg Mediannikov, Hanane Zerrouki, Seydina M. Diene, Seynabou Lo, Mouhamadou Lamine Dia, Ahmad Iyane Sow, Florence Fenollar, Jean-Marc Rolain, Linda Hadjadj
Format: Article
Language:English
Published: MDPI AG 2023-07-01
Series:Pathogens
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Online Access:https://www.mdpi.com/2076-0817/12/8/974
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author Habibou Sarr
Aissatou Ahmet Niang
Amadou Diop
Oleg Mediannikov
Hanane Zerrouki
Seydina M. Diene
Seynabou Lo
Mouhamadou Lamine Dia
Ahmad Iyane Sow
Florence Fenollar
Jean-Marc Rolain
Linda Hadjadj
author_facet Habibou Sarr
Aissatou Ahmet Niang
Amadou Diop
Oleg Mediannikov
Hanane Zerrouki
Seydina M. Diene
Seynabou Lo
Mouhamadou Lamine Dia
Ahmad Iyane Sow
Florence Fenollar
Jean-Marc Rolain
Linda Hadjadj
author_sort Habibou Sarr
collection DOAJ
description Antibiotic resistance is a public health problem. The emergence of carbapenemase-producing Enterobacterales (CPE) infections is a concern, particularly in Senegal. (1) Methods: Between January 2019 and July 2022, 240 isolates of enterobacteria resistant to third-generation cephalosporins and imipenem from biological samples from Fann Hospital (Dakar) and Hôpital Paix (Ziguinchor) were selected. The isolates were identified by MALDI-TOF mass spectrometry, and susceptibility tests were performed by the disk diffusion method. Antibiotic-resistance genes for class A beta-lactamases, carbapenemases, and plasmid resistance to colistin resistance (<i>mcr-1–8</i>) were screened by RT-PCR. (2) Results: The 240 enterobacteria were composed of: <i>Escherichia coli</i> (60.83%), <i>Klebsiella pneumoniae</i> (21.67%), <i>Enterobacter cloacae</i> (13.75%), <i>Citrobacter freundii</i> (2.08%), <i>Serratia marcescens</i> (0.83%), <i>Klebsiella aerogenes</i> (0.42%), and <i>Proteus mirabilis</i> (0.42%). Class A beta-lactamase genes were found in 229 isolates (70.41% <i>bla</i><sub>TEM</sub>, 37.5% <i>bla</i><sub>SHV</sub>, 83.75% <i>bla</i><sub>CTX-A</sub>, and 0.42% <i>bla</i><sub>CTX-B</sub>). The carbapenemase genes <i>bla</i><sub>OXA-48</sub> and <i>bla</i><sub>NDM</sub> were found in 25 isolates, including 14 isolates with <i>bla</i><sub>OXA-48</sub>, 13 isolates with <i>bla</i><sub>NDM</sub>, and 2 isolates with both genes simultaneously. The <i>mcr-8</i> gene was found in one isolate of <i>E. cloacae</i>. (3) Conclusions: The epidemiology of antibiotic-resistance genes in enterobacteria in Senegal shows the emergence of CPEs. This phenomenon is worrying, and rigorous surveillance is necessary to avoid further spread.
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spelling doaj.art-a725a3906629461e9c9e4d1a006152882023-11-19T02:31:35ZengMDPI AGPathogens2076-08172023-07-0112897410.3390/pathogens12080974The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in SenegalHabibou Sarr0Aissatou Ahmet Niang1Amadou Diop2Oleg Mediannikov3Hanane Zerrouki4Seydina M. Diene5Seynabou Lo6Mouhamadou Lamine Dia7Ahmad Iyane Sow8Florence Fenollar9Jean-Marc Rolain10Linda Hadjadj11UFR des Sciences de la Santé, Université Assane Seck de Ziguinchor, Ziguinchor BP 523, SenegalFaculté de Médecine, Pharmacie et Odonto-Stomatologie, Université Cheikh-Anta-Diop, Dakar BP 5005, SenegalFaculté de Médecine, Pharmacie et Odonto-Stomatologie, Université Cheikh-Anta-Diop, Dakar BP 5005, SenegalFaculté de Médecine et de Pharmacie, MEPHI IRD, APHM, Aix Marseille Université, 13005 Marseille, FranceFaculté de Médecine et de Pharmacie, MEPHI IRD, APHM, Aix Marseille Université, 13005 Marseille, FranceFaculté de Médecine et de Pharmacie, MEPHI IRD, APHM, Aix Marseille Université, 13005 Marseille, FranceUFR des Sciences de la Santé, Université Gaston Berger, Saint Louis BP 234, SenegalFaculté de Médecine, Pharmacie et Odonto-Stomatologie, Université Cheikh-Anta-Diop, Dakar BP 5005, SenegalFaculté de Médecine, Pharmacie et Odonto-Stomatologie, Université Cheikh-Anta-Diop, Dakar BP 5005, SenegalIHU Méditerranée Infection, 13005 Marseille, FranceFaculté de Médecine et de Pharmacie, MEPHI IRD, APHM, Aix Marseille Université, 13005 Marseille, FranceFaculté de Médecine et de Pharmacie, MEPHI IRD, APHM, Aix Marseille Université, 13005 Marseille, FranceAntibiotic resistance is a public health problem. The emergence of carbapenemase-producing Enterobacterales (CPE) infections is a concern, particularly in Senegal. (1) Methods: Between January 2019 and July 2022, 240 isolates of enterobacteria resistant to third-generation cephalosporins and imipenem from biological samples from Fann Hospital (Dakar) and Hôpital Paix (Ziguinchor) were selected. The isolates were identified by MALDI-TOF mass spectrometry, and susceptibility tests were performed by the disk diffusion method. Antibiotic-resistance genes for class A beta-lactamases, carbapenemases, and plasmid resistance to colistin resistance (<i>mcr-1–8</i>) were screened by RT-PCR. (2) Results: The 240 enterobacteria were composed of: <i>Escherichia coli</i> (60.83%), <i>Klebsiella pneumoniae</i> (21.67%), <i>Enterobacter cloacae</i> (13.75%), <i>Citrobacter freundii</i> (2.08%), <i>Serratia marcescens</i> (0.83%), <i>Klebsiella aerogenes</i> (0.42%), and <i>Proteus mirabilis</i> (0.42%). Class A beta-lactamase genes were found in 229 isolates (70.41% <i>bla</i><sub>TEM</sub>, 37.5% <i>bla</i><sub>SHV</sub>, 83.75% <i>bla</i><sub>CTX-A</sub>, and 0.42% <i>bla</i><sub>CTX-B</sub>). The carbapenemase genes <i>bla</i><sub>OXA-48</sub> and <i>bla</i><sub>NDM</sub> were found in 25 isolates, including 14 isolates with <i>bla</i><sub>OXA-48</sub>, 13 isolates with <i>bla</i><sub>NDM</sub>, and 2 isolates with both genes simultaneously. The <i>mcr-8</i> gene was found in one isolate of <i>E. cloacae</i>. (3) Conclusions: The epidemiology of antibiotic-resistance genes in enterobacteria in Senegal shows the emergence of CPEs. This phenomenon is worrying, and rigorous surveillance is necessary to avoid further spread.https://www.mdpi.com/2076-0817/12/8/974enterobacteriacarbapenemasecolistin
spellingShingle Habibou Sarr
Aissatou Ahmet Niang
Amadou Diop
Oleg Mediannikov
Hanane Zerrouki
Seydina M. Diene
Seynabou Lo
Mouhamadou Lamine Dia
Ahmad Iyane Sow
Florence Fenollar
Jean-Marc Rolain
Linda Hadjadj
The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
Pathogens
enterobacteria
carbapenemase
colistin
title The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
title_full The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
title_fullStr The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
title_full_unstemmed The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
title_short The Emergence of Carbapenem- and Colistin-Resistant Enterobacteria in Senegal
title_sort emergence of carbapenem and colistin resistant enterobacteria in senegal
topic enterobacteria
carbapenemase
colistin
url https://www.mdpi.com/2076-0817/12/8/974
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