The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl
Lilium dauricum Ker Gawler is a wild lily species that belongs to section Sinomartagon and is one of the ancestors of the Asiatic hybrid lilies. Unique traits such as disease resistance and early flowering make L. dauricum a desirable resource for interspecific hybridization. However, in Korea, the...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1676174 |
| _version_ | 1797639660938199040 |
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| author | Rahul Vasudeo Ramekar Kyong-Cheul Park Myounghai Kwak Ik-Young Choi |
| author_facet | Rahul Vasudeo Ramekar Kyong-Cheul Park Myounghai Kwak Ik-Young Choi |
| author_sort | Rahul Vasudeo Ramekar |
| collection | DOAJ |
| description | Lilium dauricum Ker Gawler is a wild lily species that belongs to section Sinomartagon and is one of the ancestors of the Asiatic hybrid lilies. Unique traits such as disease resistance and early flowering make L. dauricum a desirable resource for interspecific hybridization. However, in Korea, the natural resources of L. dauricum are being exhausted by excessive exploitation and require urgent conservation. In this study, the complete chloroplast genome of L. dauricum was generated using Illumina paired-end sequencing technology, and its structure was compared with that of other Lilium species. The chloroplast genome was 152,063 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (26,492 bp) separated by a large (81,485 bp) and small (17,584 bp) single-copy (SC) region. The genome encodes 131 different genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. A phylogenetic analysis strongly supported the relationship of L. dauricum with other members of Sinomartagon and Martagon lilies. |
| first_indexed | 2024-03-11T13:19:46Z |
| format | Article |
| id | doaj.art-a8fe8b39f6344b5491f44930af0309b4 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:19:46Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-a8fe8b39f6344b5491f44930af0309b42023-11-03T10:38:49ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423591359210.1080/23802359.2019.16761741676174The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker GawlRahul Vasudeo Ramekar0Kyong-Cheul Park1Myounghai Kwak2Ik-Young Choi3Kangwon National UniversityKangwon National UniversityNational Institute of Biological ResourcesKangwon National UniversityLilium dauricum Ker Gawler is a wild lily species that belongs to section Sinomartagon and is one of the ancestors of the Asiatic hybrid lilies. Unique traits such as disease resistance and early flowering make L. dauricum a desirable resource for interspecific hybridization. However, in Korea, the natural resources of L. dauricum are being exhausted by excessive exploitation and require urgent conservation. In this study, the complete chloroplast genome of L. dauricum was generated using Illumina paired-end sequencing technology, and its structure was compared with that of other Lilium species. The chloroplast genome was 152,063 bp long, with a typical quadripartite structure including a pair of inverted repeat regions (26,492 bp) separated by a large (81,485 bp) and small (17,584 bp) single-copy (SC) region. The genome encodes 131 different genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. A phylogenetic analysis strongly supported the relationship of L. dauricum with other members of Sinomartagon and Martagon lilies.http://dx.doi.org/10.1080/23802359.2019.1676174chloroplast genomelilium dauricumphylogenetic analysis |
| spellingShingle | Rahul Vasudeo Ramekar Kyong-Cheul Park Myounghai Kwak Ik-Young Choi The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl Mitochondrial DNA. Part B. Resources chloroplast genome lilium dauricum phylogenetic analysis |
| title | The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl |
| title_full | The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl |
| title_fullStr | The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl |
| title_full_unstemmed | The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl |
| title_short | The complete chloroplast genome of a rare species in Korea, Lilium Dauricum Ker Gawl |
| title_sort | complete chloroplast genome of a rare species in korea lilium dauricum ker gawl |
| topic | chloroplast genome lilium dauricum phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2019.1676174 |
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