ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update
<p>Abstract</p> <p>ArrayTrack™is a Food and Drug Administration (FDA) bioinformatics tool that has been widely adopted by the research community for genomics studies. It provides an integrated environment for microarray data management, analysis and interpretation. Most of its func...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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BMC
2010-08-01
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| Series: | Human Genomics |
| Subjects: | |
| Online Access: | http://www.humgenomics.com/content/4/6/428 |
| _version_ | 1798041615273558016 |
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| author | Xu Joshua Kelly Reagan Fang Hong Tong Weida |
| author_facet | Xu Joshua Kelly Reagan Fang Hong Tong Weida |
| author_sort | Xu Joshua |
| collection | DOAJ |
| description | <p>Abstract</p> <p>ArrayTrack™is a Food and Drug Administration (FDA) bioinformatics tool that has been widely adopted by the research community for genomics studies. It provides an integrated environment for microarray data management, analysis and interpretation. Most of its functionality for statistical, pathway and gene ontology analysis can also be applied independently to data generated by other molecular technologies. ArrayTrack has been undergoing active development and enhancement since its inception in 2001. This review summarises its key functionalities, with emphasis on the most recent extensions in support of the evolving needs of FDA's research programmes. ArrayTrack has added capability to manage, analyse and interpret proteomics and metabolomics data after quantification of peptides and metabolites abundance, respectively. Annotation information about single nucleotide polymorphisms and quantitative trait loci has been integrated to support genetics-related studies. Other extensions have been added to manage and analyse genomics data related to bacterial food-borne pathogens.</p> |
| first_indexed | 2024-04-11T22:23:57Z |
| format | Article |
| id | doaj.art-a90ad02a7e5e45a097483772dee2fbe2 |
| institution | Directory Open Access Journal |
| issn | 1479-7364 |
| language | English |
| last_indexed | 2024-04-11T22:23:57Z |
| publishDate | 2010-08-01 |
| publisher | BMC |
| record_format | Article |
| series | Human Genomics |
| spelling | doaj.art-a90ad02a7e5e45a097483772dee2fbe22022-12-22T03:59:54ZengBMCHuman Genomics1479-73642010-08-014642843410.1186/1479-7364-4-6-428ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an updateXu JoshuaKelly ReaganFang HongTong Weida<p>Abstract</p> <p>ArrayTrack™is a Food and Drug Administration (FDA) bioinformatics tool that has been widely adopted by the research community for genomics studies. It provides an integrated environment for microarray data management, analysis and interpretation. Most of its functionality for statistical, pathway and gene ontology analysis can also be applied independently to data generated by other molecular technologies. ArrayTrack has been undergoing active development and enhancement since its inception in 2001. This review summarises its key functionalities, with emphasis on the most recent extensions in support of the evolving needs of FDA's research programmes. ArrayTrack has added capability to manage, analyse and interpret proteomics and metabolomics data after quantification of peptides and metabolites abundance, respectively. Annotation information about single nucleotide polymorphisms and quantitative trait loci has been integrated to support genetics-related studies. Other extensions have been added to manage and analyse genomics data related to bacterial food-borne pathogens.</p>http://www.humgenomics.com/content/4/6/428Microarraybioinformaticsomics integrationSNPfood-borne pathogens |
| spellingShingle | Xu Joshua Kelly Reagan Fang Hong Tong Weida ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update Human Genomics Microarray bioinformatics omics integration SNP food-borne pathogens |
| title | ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update |
| title_full | ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update |
| title_fullStr | ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update |
| title_full_unstemmed | ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update |
| title_short | ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research -- an update |
| title_sort | arraytrack a free fda bioinformatics tool to support emerging biomedical research an update |
| topic | Microarray bioinformatics omics integration SNP food-borne pathogens |
| url | http://www.humgenomics.com/content/4/6/428 |
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