Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs

Here, authors present results of a hiPSC transcriptomics study on corticogenesis from multiple donors across four transitions in differentiation. They present a bulk data deconvolution method and show that co-culturing human NPCs with rodent astrocytes results in mutually synergistic maturation.

Bibliographic Details
Main Authors: Emily E. Burke, Joshua G. Chenoweth, Joo Heon Shin, Leonardo Collado-Torres, Suel-Kee Kim, Nicola Micali, Yanhong Wang, Carlo Colantuoni, Richard E. Straub, Daniel J. Hoeppner, Huei-Ying Chen, Alana Sellers, Kamel Shibbani, Gregory R. Hamersky, Marcelo Diaz Bustamante, BaDoi N. Phan, William S. Ulrich, Cristian Valencia, Amritha Jaishankar, Amanda J. Price, Anandita Rajpurohit, Stephen A. Semick, Roland W. Bürli, James C. Barrow, Daniel J. Hiler, Stephanie C. Page, Keri Martinowich, Thomas M. Hyde, Joel E. Kleinman, Karen F. Berman, Jose A. Apud, Alan J. Cross, Nicholas J. Brandon, Daniel R. Weinberger, Brady J. Maher, Ronald D. G. McKay, Andrew E. Jaffe
Format: Article
Language:English
Published: Nature Portfolio 2020-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-019-14266-z
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author Emily E. Burke
Joshua G. Chenoweth
Joo Heon Shin
Leonardo Collado-Torres
Suel-Kee Kim
Nicola Micali
Yanhong Wang
Carlo Colantuoni
Richard E. Straub
Daniel J. Hoeppner
Huei-Ying Chen
Alana Sellers
Kamel Shibbani
Gregory R. Hamersky
Marcelo Diaz Bustamante
BaDoi N. Phan
William S. Ulrich
Cristian Valencia
Amritha Jaishankar
Amanda J. Price
Anandita Rajpurohit
Stephen A. Semick
Roland W. Bürli
James C. Barrow
Daniel J. Hiler
Stephanie C. Page
Keri Martinowich
Thomas M. Hyde
Joel E. Kleinman
Karen F. Berman
Jose A. Apud
Alan J. Cross
Nicholas J. Brandon
Daniel R. Weinberger
Brady J. Maher
Ronald D. G. McKay
Andrew E. Jaffe
author_facet Emily E. Burke
Joshua G. Chenoweth
Joo Heon Shin
Leonardo Collado-Torres
Suel-Kee Kim
Nicola Micali
Yanhong Wang
Carlo Colantuoni
Richard E. Straub
Daniel J. Hoeppner
Huei-Ying Chen
Alana Sellers
Kamel Shibbani
Gregory R. Hamersky
Marcelo Diaz Bustamante
BaDoi N. Phan
William S. Ulrich
Cristian Valencia
Amritha Jaishankar
Amanda J. Price
Anandita Rajpurohit
Stephen A. Semick
Roland W. Bürli
James C. Barrow
Daniel J. Hiler
Stephanie C. Page
Keri Martinowich
Thomas M. Hyde
Joel E. Kleinman
Karen F. Berman
Jose A. Apud
Alan J. Cross
Nicholas J. Brandon
Daniel R. Weinberger
Brady J. Maher
Ronald D. G. McKay
Andrew E. Jaffe
author_sort Emily E. Burke
collection DOAJ
description Here, authors present results of a hiPSC transcriptomics study on corticogenesis from multiple donors across four transitions in differentiation. They present a bulk data deconvolution method and show that co-culturing human NPCs with rodent astrocytes results in mutually synergistic maturation.
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spelling doaj.art-a91415f76f3b4ff6b00a1fb9ef500aaf2022-12-21T19:33:12ZengNature PortfolioNature Communications2041-17232020-01-0111111410.1038/s41467-019-14266-zDissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCsEmily E. Burke0Joshua G. Chenoweth1Joo Heon Shin2Leonardo Collado-Torres3Suel-Kee Kim4Nicola Micali5Yanhong Wang6Carlo Colantuoni7Richard E. Straub8Daniel J. Hoeppner9Huei-Ying Chen10Alana Sellers11Kamel Shibbani12Gregory R. Hamersky13Marcelo Diaz Bustamante14BaDoi N. Phan15William S. Ulrich16Cristian Valencia17Amritha Jaishankar18Amanda J. Price19Anandita Rajpurohit20Stephen A. Semick21Roland W. Bürli22James C. Barrow23Daniel J. Hiler24Stephanie C. Page25Keri Martinowich26Thomas M. Hyde27Joel E. Kleinman28Karen F. Berman29Jose A. Apud30Alan J. Cross31Nicholas J. Brandon32Daniel R. Weinberger33Brady J. Maher34Ronald D. G. McKay35Andrew E. Jaffe36Lieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentNeuroscience, IMED Biotech Unit, AstraZenecaLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentClinical and Translational Neuroscience Branch, NIMH Intramural Research ProgramClinical and Translational Neuroscience Branch, NIMH Intramural Research ProgramNeuroscience, IMED Biotech Unit, AstraZenecaNeuroscience, IMED Biotech Unit, AstraZenecaLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentLieber Institute for Brain DevelopmentHere, authors present results of a hiPSC transcriptomics study on corticogenesis from multiple donors across four transitions in differentiation. They present a bulk data deconvolution method and show that co-culturing human NPCs with rodent astrocytes results in mutually synergistic maturation.https://doi.org/10.1038/s41467-019-14266-z
spellingShingle Emily E. Burke
Joshua G. Chenoweth
Joo Heon Shin
Leonardo Collado-Torres
Suel-Kee Kim
Nicola Micali
Yanhong Wang
Carlo Colantuoni
Richard E. Straub
Daniel J. Hoeppner
Huei-Ying Chen
Alana Sellers
Kamel Shibbani
Gregory R. Hamersky
Marcelo Diaz Bustamante
BaDoi N. Phan
William S. Ulrich
Cristian Valencia
Amritha Jaishankar
Amanda J. Price
Anandita Rajpurohit
Stephen A. Semick
Roland W. Bürli
James C. Barrow
Daniel J. Hiler
Stephanie C. Page
Keri Martinowich
Thomas M. Hyde
Joel E. Kleinman
Karen F. Berman
Jose A. Apud
Alan J. Cross
Nicholas J. Brandon
Daniel R. Weinberger
Brady J. Maher
Ronald D. G. McKay
Andrew E. Jaffe
Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
Nature Communications
title Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
title_full Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
title_fullStr Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
title_full_unstemmed Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
title_short Dissecting transcriptomic signatures of neuronal differentiation and maturation using iPSCs
title_sort dissecting transcriptomic signatures of neuronal differentiation and maturation using ipscs
url https://doi.org/10.1038/s41467-019-14266-z
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