Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach
Strain Marseille-P2915T, a Gram-positive, facultative anaerobic and nonmotile coccus, was isolated from the gastric lavage of a patient with severe anaemia. The 16S rRNA and rpoB gene comparison exhibited a sequence identity of 98.7 and 92.6% with Streptococcus infantis strain JCM 10157T, respective...
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| Format: | Article |
| Language: | English |
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Elsevier
2017-01-01
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| Series: | New Microbes and New Infections |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2052297516301251 |
| _version_ | 1819087139005005824 |
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| author | D. Ricaboni M. Mailhe J.-C. Lagier C. Michelle N. Armstrong F. Bittar V. Vitton A. Benezech D. Raoult M. Million |
| author_facet | D. Ricaboni M. Mailhe J.-C. Lagier C. Michelle N. Armstrong F. Bittar V. Vitton A. Benezech D. Raoult M. Million |
| author_sort | D. Ricaboni |
| collection | DOAJ |
| description | Strain Marseille-P2915T, a Gram-positive, facultative anaerobic and nonmotile coccus, was isolated from the gastric lavage of a patient with severe anaemia. The 16S rRNA and rpoB gene comparison exhibited a sequence identity of 98.7 and 92.6% with Streptococcus infantis strain JCM 10157T, respectively, collocating it within the ‘Streptococcus mitis’ group. On the basis of phenotypic and genomic analysis, we propose the validation of the type strain Streptococcus timonensis sp. nov. Marseille-P2915T (= DSM 103349=CSUR P2915). |
| first_indexed | 2024-12-21T21:31:23Z |
| format | Article |
| id | doaj.art-a98e84e96ea649cdb1644750a6276cab |
| institution | Directory Open Access Journal |
| issn | 2052-2975 |
| language | English |
| last_indexed | 2024-12-21T21:31:23Z |
| publishDate | 2017-01-01 |
| publisher | Elsevier |
| record_format | Article |
| series | New Microbes and New Infections |
| spelling | doaj.art-a98e84e96ea649cdb1644750a6276cab2022-12-21T18:49:37ZengElsevierNew Microbes and New Infections2052-29752017-01-0115C778810.1016/j.nmni.2016.11.013Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomachD. Ricaboni0M. Mailhe1J.-C. Lagier2C. Michelle3N. Armstrong4F. Bittar5V. Vitton6A. Benezech7D. Raoult8M. Million9Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceService de Gastroentérologie, Hôpital Nord, Assistance Publique-Hôpitaux de Marseille, Marseille, FranceService de Gastroentérologie, Hôpital Nord, Assistance Publique-Hôpitaux de Marseille, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUnité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, CNRS (UMR 7278), IRD (198), INSERM (U1095), AMU (UM63), Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, FranceStrain Marseille-P2915T, a Gram-positive, facultative anaerobic and nonmotile coccus, was isolated from the gastric lavage of a patient with severe anaemia. The 16S rRNA and rpoB gene comparison exhibited a sequence identity of 98.7 and 92.6% with Streptococcus infantis strain JCM 10157T, respectively, collocating it within the ‘Streptococcus mitis’ group. On the basis of phenotypic and genomic analysis, we propose the validation of the type strain Streptococcus timonensis sp. nov. Marseille-P2915T (= DSM 103349=CSUR P2915).http://www.sciencedirect.com/science/article/pii/S2052297516301251Culturomicshuman gut microbiotastomachStreptococcus timonensistaxonogenomics |
| spellingShingle | D. Ricaboni M. Mailhe J.-C. Lagier C. Michelle N. Armstrong F. Bittar V. Vitton A. Benezech D. Raoult M. Million Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach New Microbes and New Infections Culturomics human gut microbiota stomach Streptococcus timonensis taxonogenomics |
| title | Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach |
| title_full | Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach |
| title_fullStr | Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach |
| title_full_unstemmed | Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach |
| title_short | Noncontiguous finished genome sequence and description of Streptococcus timonensis sp. nov. isolated from the human stomach |
| title_sort | noncontiguous finished genome sequence and description of streptococcus timonensis sp nov isolated from the human stomach |
| topic | Culturomics human gut microbiota stomach Streptococcus timonensis taxonogenomics |
| url | http://www.sciencedirect.com/science/article/pii/S2052297516301251 |
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