Achieving quantitative reproducibility in label-free multisite DIA experiments through multirun alignment

Abstract DIA is a mainstream method for quantitative proteomics, but consistent quantification across multiple LC-MS/MS instruments remains a bottleneck in parallelizing data acquisition. One reason for this inconsistency and missing quantification is the retention time shift which current software...

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Bibliographic Details
Main Authors: Shubham Gupta, Justin C. Sing, Hannes L. Röst
Format: Article
Language:English
Published: Nature Portfolio 2023-10-01
Series:Communications Biology
Online Access:https://doi.org/10.1038/s42003-023-05437-2