Automatic Sorting of Dwarf Minke Whale Underwater Images

A predictable aggregation of dwarf minke whales (<i>Balaenoptera acutorostrata</i> subspecies) occurs annually in the Australian waters of the northern Great Barrier Reef in June–July, which has been the subject of a long-term photo-identification study. Researchers from the Minke Whale...

Full description

Bibliographic Details
Main Authors: Dmitry A. Konovalov, Natalie Swinhoe, Dina B. Efremova, R. Alastair Birtles, Martha Kusetic, Suzanne Hillcoat, Matthew I. Curnock, Genevieve Williams, Marcus Sheaves
Format: Article
Language:English
Published: MDPI AG 2020-04-01
Series:Information
Subjects:
Online Access:https://www.mdpi.com/2078-2489/11/4/200
_version_ 1797571053867761664
author Dmitry A. Konovalov
Natalie Swinhoe
Dina B. Efremova
R. Alastair Birtles
Martha Kusetic
Suzanne Hillcoat
Matthew I. Curnock
Genevieve Williams
Marcus Sheaves
author_facet Dmitry A. Konovalov
Natalie Swinhoe
Dina B. Efremova
R. Alastair Birtles
Martha Kusetic
Suzanne Hillcoat
Matthew I. Curnock
Genevieve Williams
Marcus Sheaves
author_sort Dmitry A. Konovalov
collection DOAJ
description A predictable aggregation of dwarf minke whales (<i>Balaenoptera acutorostrata</i> subspecies) occurs annually in the Australian waters of the northern Great Barrier Reef in June–July, which has been the subject of a long-term photo-identification study. Researchers from the Minke Whale Project (MWP) at James Cook University collect large volumes of underwater digital imagery each season (e.g., 1.8TB in 2018), much of which is contributed by citizen scientists. Manual processing and analysis of this quantity of data had become infeasible, and Convolutional Neural Networks (CNNs) offered a potential solution. Our study sought to design and train a CNN that could detect whales from video footage in complex near-surface underwater surroundings and differentiate the whales from people, boats and recreational gear. We modified known classification CNNs to localise whales in video frames and digital still images. The required high classification accuracy was achieved by discovering an effective negative-labelling training technique. This resulted in a less than 1% false-positive classification rate and below 0.1% false-negative rate. The final operation-version CNN-pipeline processed all videos (with the interval of 10 frames) in approximately four days (running on two GPUs) delivering 1.95 million sorted images.
first_indexed 2024-03-10T20:34:09Z
format Article
id doaj.art-a9b6861f5d2b498a985cfe026cea6c03
institution Directory Open Access Journal
issn 2078-2489
language English
last_indexed 2024-03-10T20:34:09Z
publishDate 2020-04-01
publisher MDPI AG
record_format Article
series Information
spelling doaj.art-a9b6861f5d2b498a985cfe026cea6c032023-11-19T21:09:34ZengMDPI AGInformation2078-24892020-04-0111420010.3390/info11040200Automatic Sorting of Dwarf Minke Whale Underwater Images Dmitry A. Konovalov0Natalie Swinhoe1Dina B. Efremova2R. Alastair Birtles3Martha Kusetic4Suzanne Hillcoat5Matthew I. Curnock6Genevieve Williams7Marcus Sheaves8College of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaFunbox Inc., 119017 Moscow, RussiaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaCSIRO Land and Water, James Cook University, Townsville, QLD 4811, AustraliaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaCollege of Science and Engineering, James Cook University, Townsville, QLD 4181, AustraliaA predictable aggregation of dwarf minke whales (<i>Balaenoptera acutorostrata</i> subspecies) occurs annually in the Australian waters of the northern Great Barrier Reef in June–July, which has been the subject of a long-term photo-identification study. Researchers from the Minke Whale Project (MWP) at James Cook University collect large volumes of underwater digital imagery each season (e.g., 1.8TB in 2018), much of which is contributed by citizen scientists. Manual processing and analysis of this quantity of data had become infeasible, and Convolutional Neural Networks (CNNs) offered a potential solution. Our study sought to design and train a CNN that could detect whales from video footage in complex near-surface underwater surroundings and differentiate the whales from people, boats and recreational gear. We modified known classification CNNs to localise whales in video frames and digital still images. The required high classification accuracy was achieved by discovering an effective negative-labelling training technique. This resulted in a less than 1% false-positive classification rate and below 0.1% false-negative rate. The final operation-version CNN-pipeline processed all videos (with the interval of 10 frames) in approximately four days (running on two GPUs) delivering 1.95 million sorted images.https://www.mdpi.com/2078-2489/11/4/200computer visiondwarf minke whalesconvolutional neural networksunderwater object classificationimage classificationdeep learning
spellingShingle Dmitry A. Konovalov
Natalie Swinhoe
Dina B. Efremova
R. Alastair Birtles
Martha Kusetic
Suzanne Hillcoat
Matthew I. Curnock
Genevieve Williams
Marcus Sheaves
Automatic Sorting of Dwarf Minke Whale Underwater Images
Information
computer vision
dwarf minke whales
convolutional neural networks
underwater object classification
image classification
deep learning
title Automatic Sorting of Dwarf Minke Whale Underwater Images
title_full Automatic Sorting of Dwarf Minke Whale Underwater Images
title_fullStr Automatic Sorting of Dwarf Minke Whale Underwater Images
title_full_unstemmed Automatic Sorting of Dwarf Minke Whale Underwater Images
title_short Automatic Sorting of Dwarf Minke Whale Underwater Images
title_sort automatic sorting of dwarf minke whale underwater images
topic computer vision
dwarf minke whales
convolutional neural networks
underwater object classification
image classification
deep learning
url https://www.mdpi.com/2078-2489/11/4/200
work_keys_str_mv AT dmitryakonovalov automaticsortingofdwarfminkewhaleunderwaterimages
AT natalieswinhoe automaticsortingofdwarfminkewhaleunderwaterimages
AT dinabefremova automaticsortingofdwarfminkewhaleunderwaterimages
AT ralastairbirtles automaticsortingofdwarfminkewhaleunderwaterimages
AT marthakusetic automaticsortingofdwarfminkewhaleunderwaterimages
AT suzannehillcoat automaticsortingofdwarfminkewhaleunderwaterimages
AT matthewicurnock automaticsortingofdwarfminkewhaleunderwaterimages
AT genevievewilliams automaticsortingofdwarfminkewhaleunderwaterimages
AT marcussheaves automaticsortingofdwarfminkewhaleunderwaterimages