The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis
Cinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in l...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1967812 |
| _version_ | 1797638730935173120 |
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| author | Qin Lv Bianjun Liang Xiaojuan Guo |
| author_facet | Qin Lv Bianjun Liang Xiaojuan Guo |
| author_sort | Qin Lv |
| collection | DOAJ |
| description | Cinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in length and includes a large single copy (LSC) region of 93,639 bp, a small single copy (SSC) region of 18,858 bp, and two inverted repeat (IR) regions of 20,114 bp. The GC content of LSC, SSC, IR and the whole genome is 37.9%, 33.8%, 44.4%, and 39.1%, respectively. There are 128 genes, including 84 protein-coding, 36 tRNA, and eight rRNA genes. The phylogenetic analysis resolved C. septentrionale in a sister position to C. glanduliferum. The complete chloroplast genome sequence of C. septentrionale provides valuable genomic information for future systematic studies on Cinnamomum. |
| first_indexed | 2024-03-11T13:07:44Z |
| format | Article |
| id | doaj.art-aa11489da5cd477db052c844d7f9f5aa |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:44Z |
| publishDate | 2021-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-aa11489da5cd477db052c844d7f9f5aa2023-11-03T14:28:30ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-09-01692770277110.1080/23802359.2021.19678121967812The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysisQin Lv0Bianjun Liang1Xiaojuan Guo2Department of Chinese Medicine, NanYang Medical CollegeDepartment of Chinese Medicine, NanYang Medical CollegeZhang Zhongjing College of Chinese Medicine, NanYang Institute of TechnologCinnamomum septentrionale is a commercially important timber tree and wild spice plant classified in the Lauraceae. Here we sequenced the complete plastid genome of C. septentrionale to contribute to its phylogenetics and bioinformatics. The chloroplast genome of C. septentrionale is 152,729 bp in length and includes a large single copy (LSC) region of 93,639 bp, a small single copy (SSC) region of 18,858 bp, and two inverted repeat (IR) regions of 20,114 bp. The GC content of LSC, SSC, IR and the whole genome is 37.9%, 33.8%, 44.4%, and 39.1%, respectively. There are 128 genes, including 84 protein-coding, 36 tRNA, and eight rRNA genes. The phylogenetic analysis resolved C. septentrionale in a sister position to C. glanduliferum. The complete chloroplast genome sequence of C. septentrionale provides valuable genomic information for future systematic studies on Cinnamomum.http://dx.doi.org/10.1080/23802359.2021.1967812cinnamomum septentrionalechloroplast genomephylogenetic analysis |
| spellingShingle | Qin Lv Bianjun Liang Xiaojuan Guo The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis Mitochondrial DNA. Part B. Resources cinnamomum septentrionale chloroplast genome phylogenetic analysis |
| title | The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis |
| title_full | The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis |
| title_fullStr | The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis |
| title_full_unstemmed | The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis |
| title_short | The complete chloroplast genome sequence of Cinnamomum septentrionale (Lauraceae) from Sichuan Province, China, a medicinal plant and phylogenetic analysis |
| title_sort | complete chloroplast genome sequence of cinnamomum septentrionale lauraceae from sichuan province china a medicinal plant and phylogenetic analysis |
| topic | cinnamomum septentrionale chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.1967812 |
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