Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China
Abies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1840938 |
| _version_ | 1797639094117859328 |
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| author | Yuan-Yuan Zhang Rui-Chen Xiang Na-Lin Dong Yan-Yan Liu Yi-Zhen Shao |
| author_facet | Yuan-Yuan Zhang Rui-Chen Xiang Na-Lin Dong Yan-Yan Liu Yi-Zhen Shao |
| author_sort | Yuan-Yuan Zhang |
| collection | DOAJ |
| description | Abies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were identified, including 68 peptide-encoding genes, 35 tRNA genes, 4 rRNA genes, 6 open reading frames, and 1 pseudogene. Thirteen genes contain introns. In phylogenetic analysis, both the ML and BI analyses supported the monophyly of the genus Abies. Our study will provide potential genetic resources for further conservation and evolutionary studies of this highly endangered species. |
| first_indexed | 2024-03-11T13:11:53Z |
| format | Article |
| id | doaj.art-aa78a975a6d64d29a2a0af16be4597b9 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:11:53Z |
| publishDate | 2020-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-aa78a975a6d64d29a2a0af16be4597b92023-11-03T14:08:16ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-10-01543821382210.1080/23802359.2020.18409381840938Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South ChinaYuan-Yuan Zhang0Rui-Chen Xiang1Na-Lin Dong2Yan-Yan Liu3Yi-Zhen Shao4College of Life Sciences, Henan Agriculture UniversityCollege of Life Sciences, Henan Agriculture UniversityCollege of Forestry, Henan Agriculture UniversityCollege of Plant Protection, Henan Agriculture UniversityCollege of Life Sciences, Henan Agriculture UniversityAbies yuanbaoshanensis is critically endangered and restricted in the Yuanbao Mountain of China, with no more than 900 surviving individuals. Here, we reported the complete chloroplast (cp) genome of A. yuanbaoshanensis. The complete chloroplast genome is 121,795 bp in size. In total, 114 genes were identified, including 68 peptide-encoding genes, 35 tRNA genes, 4 rRNA genes, 6 open reading frames, and 1 pseudogene. Thirteen genes contain introns. In phylogenetic analysis, both the ML and BI analyses supported the monophyly of the genus Abies. Our study will provide potential genetic resources for further conservation and evolutionary studies of this highly endangered species.http://dx.doi.org/10.1080/23802359.2020.1840938abies yuanbaoshanensischloroplast genomeendangeredphylogenetic |
| spellingShingle | Yuan-Yuan Zhang Rui-Chen Xiang Na-Lin Dong Yan-Yan Liu Yi-Zhen Shao Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China Mitochondrial DNA. Part B. Resources abies yuanbaoshanensis chloroplast genome endangered phylogenetic |
| title | Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China |
| title_full | Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China |
| title_fullStr | Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China |
| title_full_unstemmed | Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China |
| title_short | Next-generation sequencing yields the complete chloroplast genome of Abies yuanbaoshanensis, an endangered species from South China |
| title_sort | next generation sequencing yields the complete chloroplast genome of abies yuanbaoshanensis an endangered species from south china |
| topic | abies yuanbaoshanensis chloroplast genome endangered phylogenetic |
| url | http://dx.doi.org/10.1080/23802359.2020.1840938 |
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